RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 ZFP1Q6P2D0 407 aa22.42■■□□□ 1.18
TRIM28-204ENST00000594806 TMEM53Q6P2H8 277 aa22.42■■□□□ 1.18
TRIM28-204ENST00000594806 DNM1P34Q6PK57 102 aa22.42■■□□□ 1.18
TRIM28-204ENST00000594806 OR5K1Q8NHB7 308 aa22.42■■□□□ 1.18
TRIM28-204ENST00000594806 LILRB1Q8NHL6 650 aaPredicted RBP22.42■■□□□ 1.18
TRIM28-204ENST00000594806 PIGTQ969N2 578 aa22.42■■□□□ 1.18
TRIM28-204ENST00000594806 MBD6Q96DN6 1003 aa22.42■■□□□ 1.18
TRIM28-204ENST00000594806 NIPSNAP1Q9BPW8 284 aa22.42■■□□□ 1.18
TRIM28-204ENST00000594806 SYT4Q9H2B2 425 aa22.42■■□□□ 1.18
TRIM28-204ENST00000594806 TBC1D23Q9NUY8 699 aa22.42■■□□□ 1.18
TRIM28-204ENST00000594806 TACC2O95359 2948 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 ZNF503-AS2A6NEH8 195 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 H7C1C5 153 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 BHLHE40O14503 412 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 KHDRBS3O75525 346 aaKnown RBP22.41■■□□□ 1.18
TRIM28-204ENST00000594806 RENP00797 406 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 CECR9P0C854 216 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 CDKN2AP42771 156 aaKnown RBP22.41■■□□□ 1.18
TRIM28-204ENST00000594806 IDH3GP51553 393 aaPredicted RBP22.41■■□□□ 1.18
TRIM28-204ENST00000594806 CDH11P55287 796 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 LCN6P62502 163 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 NAAAQ02083 359 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 PTCHD4Q6ZW05 846 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 HIPK1Q86Z02 1210 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 LNX2Q8N448 690 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 NABP1Q96AH0 204 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 ZNF75AQ96N20 296 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 SH3GL3Q99963 347 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 TSSK6Q9BXA6 273 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 FAIMQ9NVQ4 179 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 CISD1Q9NZ45 108 aaKnown RBP22.41■■□□□ 1.18
TRIM28-204ENST00000594806 POU2F3Q9UKI9 436 aa22.41■■□□□ 1.18
TRIM28-204ENST00000594806 ATE1O95260 518 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 PTHP01270 115 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 HIST1H1CP16403 213 aaKnown RBP22.4■■□□□ 1.18
TRIM28-204ENST00000594806 GIPRP48546 466 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 PTDSS1P48651 473 aaKnown RBP22.4■■□□□ 1.18
TRIM28-204ENST00000594806 PIGFQ07326 219 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 SGCAQ16586 387 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 CLEC12AQ5QGZ9 265 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 OR2T33Q8NG76 320 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 TEX47Q8TBZ9 253 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 PLA2G12AQ9BZM1 189 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 C1orf198Q9H425 327 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 SEC61A2Q9H9S3 476 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 PLEKHA6Q9Y2H5 1048 aa22.4■■□□□ 1.18
TRIM28-204ENST00000594806 MAST4O15021 2626 aa22.39■■□□□ 1.18
TRIM28-204ENST00000594806 PDZD2O15018 2839 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 SLC16A7O60669 478 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 TP53P04637 393 aaPredicted RBP22.39■■□□□ 1.17
TRIM28-204ENST00000594806 SERPINA5P05154 406 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 CST2P09228 141 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 CTLA4P16410 223 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 ZNF14P17017 642 aaPredicted RBP22.39■■□□□ 1.17
TRIM28-204ENST00000594806 CD53P19397 219 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 MSR1P21757 451 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 CDAP32320 146 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 PCBD1P61457 104 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 GABPB1Q06547 395 aaPredicted RBP22.39■■□□□ 1.17
TRIM28-204ENST00000594806 NPRL3Q12980 569 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 KPNB1Q14974 876 aaKnown RBP22.39■■□□□ 1.17
TRIM28-204ENST00000594806 LEG1Q6P5S2 330 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 SYT9Q86SS6 491 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 ATG16L2Q8NAA4 619 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 OR4F15Q8NGB8 312 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 OR8D4Q8NGM9 314 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 OR4K13Q8NH42 304 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 RNF121Q9H920 327 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 CCNB1IP1Q9NPC3 277 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 CREBBPQ92793 2442 aa22.39■■□□□ 1.17
TRIM28-204ENST00000594806 A0A1W2PPL8 197 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 LAP3P28838 519 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 SPOCK1Q08629 439 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 ZNF544Q6NX49 715 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 ZDHHC13Q8IUH4 622 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 GLB1L2Q8IW92 636 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 HS3ST5Q8IZT8 346 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 SVOPLQ8N434 492 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 LRRC18Q8N456 261 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 CENPNQ96H22 339 aaPredicted RBP22.38■■□□□ 1.17
TRIM28-204ENST00000594806 NMNAT3Q96T66 252 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 DHRS9Q9BPW9 319 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 NUAK2Q9H093 628 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 POLE4Q9NR33 117 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 BEX4Q9NWD9 120 aaPredicted RBP22.38■■□□□ 1.17
TRIM28-204ENST00000594806 REV1Q9UBZ9 1251 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 KLHL21Q9UJP4 597 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 MOKQ9UQ07 419 aa22.38■■□□□ 1.17
TRIM28-204ENST00000594806 G3V2T6 193 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 SOX14O95416 240 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 MMP7P09237 267 aaPredicted RBP22.37■■□□□ 1.17
TRIM28-204ENST00000594806 OSMP13725 252 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 PRKACGP22612 351 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 PLP2Q04941 152 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.37■■□□□ 1.17
TRIM28-204ENST00000594806 ETFDHQ16134 617 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 SLC36A3Q495N2 470 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 OR52E2Q8NGJ4 325 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 FGFBP3Q8TAT2 258 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 SMAP2Q8WU79 429 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms