RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 IGHV4-61A0A0C4DH41 118 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 A8MV72 311 aaPredicted RBP11.93□□□□□ -0.5
APOC1-208ENST00000592535 M0R233 179 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 SYNGR3O43761 229 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 STAMBPO95630 424 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 ERCC1P07992 297 aaPredicted RBP11.93□□□□□ -0.5
APOC1-208ENST00000592535 NR2C1P13056 603 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 SLC9A3P48764 834 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 EVX1P49640 407 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 MAD2L1BPQ15013 274 aaPredicted RBP11.93□□□□□ -0.5
APOC1-208ENST00000592535 ANKDD1AQ495B1 522 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 TMPRSS11FQ6ZWK6 438 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 SLC7A13Q8TCU3 470 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 BPESC1Q9GZL8 116 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 OR51B6Q9H340 312 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 C1orf198Q9H425 327 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 ANKRD19PQ9H560 264 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 SIAEQ9HAT2 523 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 CDH20Q9HBT6 801 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 DCAF13Q9NV06 445 aaKnown RBP11.93□□□□□ -0.5
APOC1-208ENST00000592535 NDUFAF4Q9P032 175 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 REV1Q9UBZ9 1251 aa11.93□□□□□ -0.5
APOC1-208ENST00000592535 IQCMA0A1B0GVH7 501 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 MGRN1O60291 552 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 DIRAS1O95057 198 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 H1F0P07305 194 aaKnown RBP11.92□□□□□ -0.5
APOC1-208ENST00000592535 ZNF16P17020 682 aaPredicted RBP11.92□□□□□ -0.5
APOC1-208ENST00000592535 ZNF26P17031 533 aaPredicted RBP11.92□□□□□ -0.5
APOC1-208ENST00000592535 ZNF32P17041 273 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 TCN1P20061 433 aaPredicted RBP11.92□□□□□ -0.5
APOC1-208ENST00000592535 APEX1P27695 318 aaKnown RBP11.92□□□□□ -0.5
APOC1-208ENST00000592535 ALDH3B1P43353 468 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 ERVS71-1P61550 626 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 ERVK-25P63136 954 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 CBX1P83916 185 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 HSF2Q03933 536 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 PLP2Q04941 152 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 SGCAQ16586 387 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 TBC1D28Q2M2D7 210 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 PABPC1L2AQ5JQF8 200 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 THEM4Q5T1C6 240 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 FAM205BPQ63HN1 556 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 CYB5R2Q6BCY4 276 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 RGS7BPQ6MZT1 257 aaPredicted RBP11.92□□□□□ -0.5
APOC1-208ENST00000592535 PODNL1Q6PEZ8 512 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 RRM2BQ7LG56 351 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 HIPK1Q86Z02 1210 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 CPEB3Q8NE35 698 aaKnown RBP11.92□□□□□ -0.5
APOC1-208ENST00000592535 FAM46AQ96IP4 442 aaKnown RBP11.92□□□□□ -0.5
APOC1-208ENST00000592535 C7orf34Q96L11 122 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 RBP7Q96R05 134 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 KCNN2Q9H2S1 579 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 CCNB1IP1Q9NPC3 277 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 ARL8BQ9NVJ2 186 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 DUSP13Q9UII6 198 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 SAMD4AQ9UPU9 718 aaKnown RBP11.92□□□□□ -0.5
APOC1-208ENST00000592535 ADAM18Q9Y3Q7 739 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 FAM32AQ9Y421 112 aaKnown RBP11.92□□□□□ -0.5
APOC1-208ENST00000592535 V9GYQ6 96 aa11.92□□□□□ -0.5
APOC1-208ENST00000592535 A0A1W2PPW3 197 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 A0A1W2PRQ8 180 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 SLC22A23A1A5C7 686 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 A6NIZ1 184 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 LYNX1G3V0Z9 82 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 H7C1C5 153 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 GMNNO75496 209 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 SNAP29O95721 258 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 CLPTM1O96005 669 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 PTHP01270 115 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 LYNX1P0DP58 116 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 APEHP13798 732 aaKnown RBP11.91□□□□□ -0.5
APOC1-208ENST00000592535 RHCEP18577 417 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 GIFP27352 417 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 APLNRP35414 380 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 MSX2P35548 267 aaPredicted RBP11.91□□□□□ -0.5
APOC1-208ENST00000592535 RPL4P36578 427 aaKnown RBP11.91□□□□□ -0.5
APOC1-208ENST00000592535 RAP1BP61224 184 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 LCN6P62502 163 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 RAP1AP62834 184 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 DGCR6Q14129 220 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 ZBED5Q49AG3 693 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 IQCCQ4KMZ1 466 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 FGD3Q5JSP0 725 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 FOXL2NBQ6ZUU3 175 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 PIGWQ7Z7B1 504 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 PGAM4Q8N0Y7 254 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 ZNF786Q8N393 782 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 ARIH2OSQ8N7S6 290 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 OR1J2Q8NGS2 313 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 AKR7LQ8NHP1 331 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 FNDC8Q8TC99 324 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 UBASH3BQ8TF42 649 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 MS4A5Q9H3V2 200 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 TAGLN3Q9UI15 199 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 TMEM5Q9Y2B1 443 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 ARL2BPQ9Y2Y0 163 aa11.91□□□□□ -0.5
APOC1-208ENST00000592535 TRBV4-1A0A0J9YWV2 114 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 A0A1W2PPL8 197 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 LCKP06239 509 aa11.9□□□□□ -0.5
APOC1-208ENST00000592535 CD14P08571 375 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms