RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 IFNGR2P38484 337 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 ALDH3B1P43353 468 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 DIO1P49895 249 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 RNF144AP50876 292 aaPredicted RBP5.17□□□□□ -1.58
VPS25-204ENST00000589577 MAP2K6P52564 334 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 SLC16A1P53985 500 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 TUBA1BP68363 451 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 TUBA4AP68366 448 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 LCN2P80188 198 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 MRPS11P82912 194 aaKnown RBP5.17□□□□□ -1.58
VPS25-204ENST00000589577 SPIBQ01892 262 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 ST3GAL3Q11203 375 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 SELENBP1Q13228 472 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 GK3PQ14409 553 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 KPNB1Q14974 876 aaKnown RBP5.17□□□□□ -1.58
VPS25-204ENST00000589577 MAD2L1BPQ15013 274 aaPredicted RBP5.17□□□□□ -1.58
VPS25-204ENST00000589577 FXNQ16595 210 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 FGD3Q5JSP0 725 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 SWT1Q5T5J6 900 aaKnown RBP5.17□□□□□ -1.58
VPS25-204ENST00000589577 C1QTNF12Q5T7M4 302 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 AP1ARQ63HQ0 302 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 WBP2NLQ6ICG8 309 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 FIP1L1Q6UN15 594 aaKnown RBP5.17□□□□□ -1.58
VPS25-204ENST00000589577 C5orf46Q6UWT4 87 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 C9orf139Q6ZV77 190 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 TUBA1AQ71U36 451 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 HMGN2P46Q86SG4 172 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 C10orf111Q8N326 155 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 CADM2Q8N3J6 435 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 OR4F15Q8NGB8 312 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 OR5W2Q8NH69 310 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 LINC01006Q8NI28 216 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 ST8SIA1Q92185 356 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 RAB39BQ96DA2 213 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 PRRC1Q96M27 445 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 OR5B2Q96R09 309 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 EPYCQ99645 322 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 MCHR1Q99705 422 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 KCNS3Q9BQ31 491 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 ZNF416Q9BWM5 594 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 CHIAQ9BZP6 476 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 NELFAQ9H3P2 528 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 REEP1Q9H902 201 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 TCF7L1Q9HCS4 588 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 MMP26Q9NRE1 261 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 EMC3Q9P0I2 261 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 MYEF2Q9P2K5 600 aaKnown RBP5.17□□□□□ -1.58
VPS25-204ENST00000589577 ASH2LQ9UBL3 628 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 REV1Q9UBZ9 1251 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 RNF114Q9Y508 228 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 AP4S1Q9Y587 144 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 ENPP4Q9Y6X5 453 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 DOCK11Q5JSL3 2073 aa5.17□□□□□ -1.58
VPS25-204ENST00000589577 PPIAL4EA0A075B759 164 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 IGHV3OR16-10A0A075B7F0 116 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 PPIAL4CA0A0B4J2A2 164 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 IGHV2OR16-5A0A0B4J2B6 119 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 TCRBV3S1A0A5B6 114 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 PRAMEF27A3QJZ7 478 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 TRAPPC13A5PLN9 417 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ZNF503-AS2A6NEH8 195 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 CPSF4LA6NMK7 179 aaKnown RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 ANKRD65E5RJM6 399 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 PPIAL4DF5H284 164 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 K7EIL1 84 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 M0R233 179 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 M0R3H8 397 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ETV2O00321 342 aaPredicted RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 FAAHO00519 579 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 ACOT8O14734 319 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 SYNGR3O43761 229 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 TPST1O60507 370 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 MRPL33O75394 65 aaKnown RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 KRT36O76013 467 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 OR5F1O95221 314 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 GADD45GO95257 159 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 BAG2O95816 211 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 CST1P01037 141 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 IGKV3-15P01624 115 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 C1QCP02747 245 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 H1F0P07305 194 aaKnown RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 CSF1P09603 554 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 GKN3PP0CG01 181 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 PPIAL4FP0DN26 164 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 THRBP10828 461 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 CDH2P19022 906 aaPredicted RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 MPGP29372 298 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 APOBEC1P41238 236 aaKnown RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 OR1E2P47887 323 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 IDH2P48735 452 aaKnown RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 POLR2HP52434 150 aaKnown RBP5.16□□□□□ -1.58
VPS25-204ENST00000589577 MS4A2Q01362 244 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 MERTKQ12866 999 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 EPS8Q12929 822 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 SKP2Q13309 424 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 TRAM2Q15035 370 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 MAPK14Q16539 360 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 DUSP7Q16829 419 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 NDUFAF6Q330K2 333 aa5.16□□□□□ -1.58
VPS25-204ENST00000589577 C3orf36Q3SXR2 165 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms