RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MRPS34P82930 218 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 ZIK1Q3SY52 487 aaPredicted RBP16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 FOXL2NBQ6ZUU3 175 aa16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 OR6V1Q8N148 313 aa16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 OR9Q1Q8NGQ5 310 aa16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 SH3GL3Q99963 347 aa16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 SEC61A2Q9H9S3 476 aa16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 SLC24A3Q9HC58 644 aa16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 SRA1Q9HD15 236 aaKnown RBP16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 ZNF226Q9NYT6 803 aa16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 ZNF224Q9NZL3 707 aa16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 KCNN3Q9UGI6 736 aa16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 B9D1Q9UPM9 204 aa16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 COA3Q9Y2R0 106 aaPredicted RBP16.59■□□□□ 0.25
CLPTM1-209ENST00000588855 ARPC4-TTLL3A0A0A6YYG9 625 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 CASQ2O14958 399 aaPredicted RBP16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 KHDRBS3O75525 346 aaKnown RBP16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 HMGN1P05114 100 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 CRYGSP22914 178 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 CRABP1P29762 137 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 RAD23AP54725 363 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 UBE2NP61088 152 aaKnown RBP16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 SLX4IPQ5VYV7 408 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 ZNF787Q6DD87 383 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 DNM1P34Q6PK57 102 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 SKA3Q8IX90 412 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 TVP23BQ9NYZ1 205 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 NPAP1Q9NZP6 1156 aa16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 RRP15Q9Y3B9 282 aaKnown RBP16.58■□□□□ 0.24
CLPTM1-209ENST00000588855 FAM183AA6NL82 134 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 M0R129 80 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 CASKO14936 926 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 SIAH2O43255 324 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 GPANK1O95872 356 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 HLA-HP01893 362 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 SCG5P05408 212 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 OR8G3PP0DMU2 310 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 HOXB1P14653 301 aaPredicted RBP16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 CAPZA2P47755 286 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 SLC34A1Q06495 639 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 SGCAQ16586 387 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 NRN1LQ496H8 165 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 OGFRL1Q5TC84 451 aaPredicted RBP16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 C12orf73Q69YU5 71 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 ZBTB46Q86UZ6 589 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 GALNT4Q8N4A0 578 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 FGFBP3Q8TAT2 258 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 MBOAT4Q96T53 435 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 HCAR1Q9BXC0 346 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 C1QTNF6Q9BXI9 259 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 TEX12Q9BXU0 123 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 NMNAT2Q9BZQ4 307 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 RACGAP1Q9H0H5 632 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 TOR3AQ9H497 397 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 MED20Q9H944 212 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 NOX3Q9HBY0 568 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 OBP2BQ9NPH6 170 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 FKBP7Q9Y680 259 aa16.57■□□□□ 0.24
CLPTM1-209ENST00000588855 FAM171A2A8MVW0 826 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 MGRN1O60291 552 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 FARS2O95363 451 aaKnown RBP16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 SNAP29O95721 258 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 WNT11O96014 354 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 PATE4P0C8F1 98 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 CLUP10909 449 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 NPR2P20594 1047 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 LAP3P28838 519 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 PYCR1P32322 319 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 CENPAP49450 140 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 OTPQ5XKR4 325 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 LRRC18Q8N456 261 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 ZNRF4Q8WWF5 429 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 PLEKHA8Q96JA3 519 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 SLC38A2Q96QD8 506 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 SIAEQ9HAT2 523 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 POLE4Q9NR33 117 aa16.56■□□□□ 0.24
CLPTM1-209ENST00000588855 MPZL1O95297 269 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 GYPBP06028 91 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 GAAP10253 952 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 CD79AP11912 226 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 MSR1P21757 451 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 ZNF83P51522 516 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 SLC25A1P53007 311 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 SNAPC1Q16533 368 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 SLC16A14Q7RTX9 510 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 GLB1L2Q8IW92 636 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 PROKR2Q8NFJ6 384 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 OR51L1Q8NGJ5 315 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 OR2T4Q8NH00 348 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 MARVELD3Q96A59 401 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 OTULINQ96BN8 352 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 PRRG3Q9BZD7 231 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 GRIP2Q9C0E4 1043 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 EMC7Q9NPA0 242 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 HINT3Q9NQE9 182 aaKnown RBP16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 FBN2P35556 2912 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 DEFB108AA8MXU0 73 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 DLGAP1O14490 977 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 SPI1P17947 270 aa16.55■□□□□ 0.24
CLPTM1-209ENST00000588855 PAICSP22234 425 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms