RNA–Protein interactions for RNA: ENST00000588237.5

GRN-213, Transcript of granulin precursor, human

TSL 5

Gene GRN, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-213	ENST00000588237	NDEL1	Q9GZM8	345 aa		11.44	□□□□□ -0.58
GRN-213	ENST00000588237	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.44	□□□□□ -0.58
GRN-213	ENST00000588237	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.44	□□□□□ -0.58
GRN-213	ENST00000588237	DUSP13	Q9UII6	198 aa		11.44	□□□□□ -0.58
GRN-213	ENST00000588237	ARL2BP	Q9Y2Y0	163 aa		11.44	□□□□□ -0.58
GRN-213	ENST00000588237	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.44	□□□□□ -0.58	1e-7	■■■□□ 16.1
GRN-213	ENST00000588237		A0A1W2PPL8	197 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	TMEM129	A0AVI4	362 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237		A6NIZ1	184 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	NPIPB13	A6NJU9	1138 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	NPIPB4	C9JG80	1138 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237		M0R233	179 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	NDUFS8	O00217	210 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	DCTN3	O75935	186 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	DIRAS1	O95057	198 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	LCK	P06239	509 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	TSPAN19	P0C672	248 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	APLNR	P35414	380 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	SLC9A3	P48764	834 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	SELENOV	P59797	346 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	RAP1B	P61224	184 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	RAP1A	P62834	184 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	ERVK-25	P63136	954 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	ANKDD1A	Q495B1	522 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	THEM4	Q5T1C6	240 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	C10orf128	Q5T292	105 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	FAM205BP	Q63HN1	556 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.43	□□□□□ -0.58
GRN-213	ENST00000588237	PODNL1	Q6PEZ8	512 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	CLDN22	Q8N7P3	220 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	FNDC8	Q8TC99	324 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	FAM46A	Q96IP4	442 aa	Known RBP	11.43	□□□□□ -0.58
GRN-213	ENST00000588237	TSPAN32	Q96QS1	320 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	KCNK17	Q96T54	332 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	SEPHS2	Q99611	448 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	C1orf198	Q9H425	327 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	SIAE	Q9HAT2	523 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	DCAF13	Q9NV06	445 aa	Known RBP	11.43	□□□□□ -0.58
GRN-213	ENST00000588237	GRHPR	Q9UBQ7	328 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	REV1	Q9UBZ9	1251 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	TAGLN3	Q9UI15	199 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	AURKC	Q9UQB9	309 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	TMEM5	Q9Y2B1	443 aa		11.43	□□□□□ -0.58
GRN-213	ENST00000588237	IGKV1D-43	A0A0B4J1Z2	117 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	SLC22A23	A1A5C7	686 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237		A8MV72	311 aa	Predicted RBP	11.42	□□□□□ -0.58
GRN-213	ENST00000588237		H7C1C5	153 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	XKRY	O14609	159 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	SYNGR3	O43761	229 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	MGRN1	O60291	552 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	PRSS23	O95084	383 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	IGHM	P01871	453 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	APEH	P13798	732 aa	Known RBP	11.42	□□□□□ -0.58
GRN-213	ENST00000588237	RHCE	P18577	417 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	APEX1	P27695	318 aa	Known RBP	11.42	□□□□□ -0.58
GRN-213	ENST00000588237	MSX2	P35548	267 aa	Predicted RBP	11.42	□□□□□ -0.58
GRN-213	ENST00000588237	ALDH3B1	P43353	468 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	NR4A2	P43354	598 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	LCN6	P62502	163 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	MRPS34	P82930	218 aa	Known RBP	11.42	□□□□□ -0.58
GRN-213	ENST00000588237	NKPD1	Q17RQ9	610 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	ALKBH6	Q3KRA9	238 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	NRN1L	Q496H8	165 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	ZBED5	Q49AG3	693 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	PABPC1L2A	Q5JQF8	200 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	SAMD4B	Q5PRF9	694 aa	Known RBP	11.42	□□□□□ -0.58
GRN-213	ENST00000588237	CYB5R2	Q6BCY4	276 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	SLC25A47	Q6Q0C1	308 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	LRP11	Q86VZ4	500 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	PGAM4	Q8N0Y7	254 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	FAM86B1	Q8N7N1	296 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	ZNF540	Q8NDQ6	660 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	OR52J3	Q8NH60	311 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	MCUR1	Q96AQ8	359 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	NSMCE2	Q96MF7	247 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	CDRT15	Q96T59	188 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	MS4A5	Q9H3V2	200 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	ANKRD19P	Q9H560	264 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	SMURF2	Q9HAU4	748 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.42	□□□□□ -0.58
GRN-213	ENST00000588237	ARL8B	Q9NVJ2	186 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	NDUFAF4	Q9P032	175 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237	MAGEL2	Q9UJ55	1249 aa		11.42	□□□□□ -0.58
GRN-213	ENST00000588237		A0A096LNT2	108 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	CDC42EP2	O14613	210 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	ZNF32	P17041	273 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	ITGA2	P17301	1181 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	RAD52	P43351	418 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	EVX1	P49640	407 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	ZNF133	P52736	654 aa	Predicted RBP	11.41	□□□□□ -0.58
GRN-213	ENST00000588237	VLDLR	P98155	873 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	SPIB	Q01892	262 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.41	□□□□□ -0.58
GRN-213	ENST00000588237	FXN	Q16595	210 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	MSMP	Q1L6U9	139 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	C16orf89	Q6UX73	402 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	TMPRSS11F	Q6ZWK6	438 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.41	□□□□□ -0.58
GRN-213	ENST00000588237	LRRC75A	Q8NAA5	344 aa		11.41	□□□□□ -0.58
GRN-213	ENST00000588237	AKR7L	Q8NHP1	331 aa		11.41	□□□□□ -0.58

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