RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TGM4P49221 684 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 SUCLG1P53597 346 aaKnown RBP17.68■□□□□ 0.42
TRIM47-204ENST00000587339 SLC17A1Q14916 467 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 LIPNQ5VXI9 398 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 GLB1L2Q8IW92 636 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 TMEM251Q8N6I4 163 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 FDCSPQ8NFU4 85 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 FNDC8Q8TC99 324 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 HAVCR2Q8TDQ0 301 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 ASB17Q8WXJ9 295 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 TTYH2Q9BSA4 534 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 MED18Q9BUE0 208 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 MFRPQ9BY79 579 aa17.68■□□□□ 0.42
TRIM47-204ENST00000587339 SMAD9O15198 467 aaKnown RBP17.67■□□□□ 0.42
TRIM47-204ENST00000587339 TLX3O43711 291 aaPredicted RBP17.67■□□□□ 0.42
TRIM47-204ENST00000587339 GAAP10253 952 aa17.67■□□□□ 0.42
TRIM47-204ENST00000587339 EIF1AXP47813 144 aaKnown RBP17.67■□□□□ 0.42
TRIM47-204ENST00000587339 MRPL28Q13084 256 aaKnown RBP17.67■□□□□ 0.42
TRIM47-204ENST00000587339 ZNF829Q3KNS6 432 aaPredicted RBP17.67■□□□□ 0.42
TRIM47-204ENST00000587339 ASB18Q6ZVZ8 466 aa17.67■□□□□ 0.42
TRIM47-204ENST00000587339 OR9K2Q8NGE7 335 aa17.67■□□□□ 0.42
TRIM47-204ENST00000587339 OR10D3Q8NH80 312 aa17.67■□□□□ 0.42
TRIM47-204ENST00000587339 OR2V1Q8NHB1 315 aa17.67■□□□□ 0.42
TRIM47-204ENST00000587339 ABHD4Q8TB40 342 aa17.67■□□□□ 0.42
TRIM47-204ENST00000587339 SLC25A46Q96AG3 418 aa17.67■□□□□ 0.42
TRIM47-204ENST00000587339 ADGRG7Q96K78 797 aa17.67■□□□□ 0.42
TRIM47-204ENST00000587339 AMELYQ99218 206 aa17.67■□□□□ 0.42
TRIM47-204ENST00000587339 KLHL9Q9P2J3 617 aa17.67■□□□□ 0.42
TRIM47-204ENST00000587339 DCDC2BA2VCK2 349 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 CASKO14936 926 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 CXCL13O43927 109 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 RPP14O95059 124 aaKnown RBP17.66■□□□□ 0.42
TRIM47-204ENST00000587339 ABHD16AO95870 558 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 CD1AP06126 327 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 ZNF766Q5HY98 468 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 ZNF454Q8N9F8 522 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 ZFP62Q8NB50 900 aaPredicted RBP17.66■□□□□ 0.42
TRIM47-204ENST00000587339 TMEM178AQ8NBL3 297 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 S100ZQ8WXG8 99 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 SF3B5Q9BWJ5 86 aaKnown RBP17.66■□□□□ 0.42
TRIM47-204ENST00000587339 BARHL1Q9BZE3 327 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 PLGRKTQ9HBL7 147 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 HMG20AQ9NP66 347 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 CLDN25C9JDP6 229 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 UPK3AO75631 287 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 GLSO94925 669 aaPredicted RBP17.66■□□□□ 0.42
TRIM47-204ENST00000587339 SERPINA3P01011 423 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 HRGP04196 525 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 HIST3H3Q16695 136 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 RSPO4Q2I0M5 234 aaPredicted RBP17.66■□□□□ 0.42
TRIM47-204ENST00000587339 HYAL4Q2M3T9 481 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 DEFB109BQ30KR1 87 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 KCTD18Q6PI47 426 aaPredicted RBP17.66■□□□□ 0.42
TRIM47-204ENST00000587339 LRRC69Q6ZNQ3 347 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.66■□□□□ 0.42
TRIM47-204ENST00000587339 SCMH1Q96GD3 660 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 ZNF385AQ96PM9 386 aaKnown RBP17.66■□□□□ 0.42
TRIM47-204ENST00000587339 PDCD1LG2Q9BQ51 273 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 MROQ9BYG7 248 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 TIGARQ9NQ88 270 aa17.66■□□□□ 0.42
TRIM47-204ENST00000587339 DVL2O14641 736 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 GFRA3O60609 400 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 SC5DO75845 299 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 CLEC2LP0C7M8 214 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 NR2C1P13056 603 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 S100A5P33763 92 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 TNFSF10P50591 281 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 CLDN15P56746 228 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 NANOS3P60323 173 aaKnown RBP17.65■□□□□ 0.42
TRIM47-204ENST00000587339 PPIAP62937 165 aaKnown RBP17.65■□□□□ 0.42
TRIM47-204ENST00000587339 EIF2B1Q14232 305 aaKnown RBP17.65■□□□□ 0.42
TRIM47-204ENST00000587339 TEX30Q5JUR7 227 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 PDSS1Q5T2R2 415 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 CEACAM19Q7Z692 300 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 SLC22A16Q86VW1 577 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 HSD17B8Q92506 261 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 MCHR2Q969V1 340 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 OR8B4Q96RC9 309 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 KCNS3Q9BQ31 491 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 ABHD6Q9BV23 337 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 SLCO1C1Q9NYB5 712 aa17.65■□□□□ 0.42
TRIM47-204ENST00000587339 HSPB2A8KAH6 182 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 GPRIN2O60269 458 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 TMCC2O75069 709 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 CALRP27797 417 aaKnown RBP17.64■□□□□ 0.42
TRIM47-204ENST00000587339 LAP3P28838 519 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 HSPB2Q16082 182 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 PCK2Q16822 640 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 ACSM3Q53FZ2 586 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 LRRN1Q6UXK5 716 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 ZNF679Q8IYX0 411 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 OR13C5Q8NGS8 318 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 RPS4Y2Q8TD47 263 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 CPNE4Q96A23 557 aaPredicted RBP17.64■□□□□ 0.42
TRIM47-204ENST00000587339 RNF166Q96A37 237 aaPredicted RBP17.64■□□□□ 0.42
TRIM47-204ENST00000587339 SLC6A15Q9H2J7 730 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 AKIP1Q9NQ31 210 aa17.64■□□□□ 0.42
TRIM47-204ENST00000587339 A0A075B6Q4 140 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 A0A1W2PPL8 197 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 AQP8O94778 261 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms