RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 RNF13O43567 381 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 ENTPD5O75356 428 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 CRYGBP07316 175 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 ZNF250P15622 560 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 RPS2P15880 293 aaKnown RBP3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 CDKN2BP42772 138 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 NSG1P42857 185 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 ACLYP53396 1101 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 LINC00315P59091 139 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 TWF1Q12792 350 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 POU2AF1Q16633 256 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 KCTD19Q17RG1 926 aaPredicted RBP3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 SPECC1LQ69YQ0 1117 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 DNAJC24Q6P3W2 148 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 ZYG11AQ6WRX3 759 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 Q6ZSR3 168 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 ABHD13Q7L211 337 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 OR10G2Q8NGC3 310 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 OR5B3Q8NH48 314 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 ZNF502Q8TBZ5 544 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 NUP58Q9BVL2 599 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 ZNF629Q9UEG4 869 aaPredicted RBP3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 OR12D3Q9UGF7 316 aa3.4□□□□□ -1.87
SMARCE1-219ENST00000583294 CARMIL3Q8ND23 1372 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 CDC7O00311 574 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 DPM1O60762 260 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 ZNF324O75467 553 aaPredicted RBP3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 GABARAPO95166 117 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 TSPAN13O95857 204 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 TROVE2P10155 538 aaKnown RBP eCLIP3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 ZNF24P17028 368 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 GDI1P31150 447 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 MAS1LP35410 378 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 SSR4P51571 173 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 MNAT1P51948 309 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 PTPN20Q4JDL3 420 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 XKR7Q5GH72 579 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 CCNJQ5T5M9 372 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 SLC8B1Q6J4K2 584 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 OR56B2PQ8NGI1 322 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 RASD2Q96D21 266 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 FOPNLQ96NB1 174 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 SERPINB12Q96P63 405 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 MYCBPQ99417 103 aaPredicted RBP3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 SAMSN1Q9NSI8 373 aaKnown RBP3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 GOLT1BQ9Y3E0 138 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 MROH7-TTC4A0A0A0MT08 1334 aa3.39□□□□□ -1.87
SMARCE1-219ENST00000583294 LRRIQ3A6PVS8 624 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 LSM1O15116 133 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 AIREO43918 545 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 TMED10P49755 219 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 CDH6P55285 790 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 MRPL23Q16540 153 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 PRAMEF20Q5VT98 475 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 TEX43Q6ZNM6 134 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 FAM92BQ6ZTR7 304 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 MMAAQ8IVH4 418 aaKnown RBP3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 FBXL13Q8NEE6 735 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 OR10G4Q8NGN3 311 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 OR4S2Q8NH73 311 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 CNDP1Q96KN2 507 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 OR5B12Q96R08 314 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 ILKAPQ9H0C8 392 aaPredicted RBP3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 LINC00597Q9H2U6 94 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 CYTL1Q9NRR1 136 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 PSG8Q9UQ74 426 aa3.38□□□□□ -1.87
SMARCE1-219ENST00000583294 IGHV5-51A0A0C4DH38 117 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 IGHV3-66A0A0C4DH42 116 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 A0A1W2PP18 115 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 AIM2O14862 343 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 MRPS12O15235 138 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 CLOCKO15516 846 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 CLPXO76031 633 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 RAB3DO95716 219 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 CEACAM6P40199 344 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 AQP2P41181 271 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 NAA10P41227 235 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 TCP10Q12799 353 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 MAB21L1Q13394 359 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 GINS1Q14691 196 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 FAM83EQ2M2I3 478 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 ANKRD22Q5VYY1 191 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 HDDC2Q7Z4H3 204 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 OR5W2Q8NH69 310 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 RAB3IL1Q8TBN0 382 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 TSNARE1Q96NA8 513 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 OR2A5Q96R48 311 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 CCDC77Q9BR77 488 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 CHAC1Q9BUX1 264 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 OR51M1Q9H341 326 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 ANKRA2Q9H9E1 313 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 ZNF222Q9UK12 451 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 ST3GAL6Q9Y274 331 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 PCM1Q15154 2024 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 USP47Q96K76 1375 aa3.37□□□□□ -1.87
SMARCE1-219ENST00000583294 NUP214P35658 2090 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1-219ENST00000583294 GLYATL1P3A0A0U1RQE8 302 aa3.36□□□□□ -1.87
SMARCE1-219ENST00000583294 SMCO3A2RU48 225 aa3.36□□□□□ -1.87
SMARCE1-219ENST00000583294 TRIM64CA6NLI5 447 aa3.36□□□□□ -1.87
SMARCE1-219ENST00000583294 AP3B1O00203 1094 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms