RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SPTBN2O15020 2390 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 A0A1W2PPK0 400 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 C21orf140B9A014 251 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 SNPHO15079 494 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 GPANK1O95872 356 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 HPP00738 406 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 OR2B6P58173 313 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 RPS15P62841 145 aaKnown RBP20.29■□□□□ 0.84
CCDC47-204ENST00000582252 SLC17A1Q14916 467 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 IGF2-ASQ6U949 168 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 KRT77Q7Z794 578 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 ITPKCQ96DU7 683 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 OR5B2Q96R09 309 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 SACM1LQ9NTJ5 587 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 SLCO1C1Q9NYB5 712 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 FARSAQ9Y285 508 aaKnown RBP20.29■□□□□ 0.84
CCDC47-204ENST00000582252 COA3Q9Y2R0 106 aaPredicted RBP20.29■□□□□ 0.84
CCDC47-204ENST00000582252 PIEZO1Q92508 2521 aa20.29■□□□□ 0.84
CCDC47-204ENST00000582252 RAD1O60671 282 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 RAF1P04049 648 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 OTX2P32243 289 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 CCR9P51686 369 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 DSCR4P56555 118 aaPredicted RBP20.28■□□□□ 0.84
CCDC47-204ENST00000582252 ROM1Q03395 351 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 CHAF1BQ13112 559 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 EIF2B1Q14232 305 aaKnown RBP20.28■□□□□ 0.84
CCDC47-204ENST00000582252 TAB1Q15750 504 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 RSPO4Q2I0M5 234 aaPredicted RBP20.28■□□□□ 0.84
CCDC47-204ENST00000582252 SLC25A35Q3KQZ1 300 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 BAIAP2L2Q6UXY1 529 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 PPP1R32Q7Z5V6 425 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 SGCZQ96LD1 299 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 RBP7Q96R05 134 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 ELOVL3Q9HB03 270 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 RABL2AQ9UBK7 228 aaPredicted RBP20.28■□□□□ 0.84
CCDC47-204ENST00000582252 RABL2BQ9UNT1 228 aa20.28■□□□□ 0.84
CCDC47-204ENST00000582252 TRBV5-5A0A0J9YX44 114 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.27■□□□□ 0.84
CCDC47-204ENST00000582252 ZNF254O75437 659 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 PTGS2P35354 604 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 RIDAP52758 137 aaKnown RBP20.27■□□□□ 0.84
CCDC47-204ENST00000582252 P2RY14Q15391 338 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 INPP5JQ15735 1006 aaPredicted RBP20.27■□□□□ 0.84
CCDC47-204ENST00000582252 ZNF239Q16600 458 aaKnown RBP20.27■□□□□ 0.84
CCDC47-204ENST00000582252 MEP1BQ16820 701 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 CEP78Q5JTW2 689 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 MZT2BQ6NZ67 158 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 NRARPQ7Z6K4 114 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 GTPBP8Q8N3Z3 284 aaPredicted RBP20.27■□□□□ 0.84
CCDC47-204ENST00000582252 OR1J4Q8NGS1 313 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 GPR148Q8TDV2 347 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 RNF128Q8TEB7 428 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 HSD17B8Q92506 261 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 RGP1Q92546 391 aaPredicted RBP20.27■□□□□ 0.84
CCDC47-204ENST00000582252 GPR87Q9BY21 358 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 TCF7L1Q9HCS4 588 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 SH2D2AQ9NP31 389 aa20.27■□□□□ 0.84
CCDC47-204ENST00000582252 AK6Q9Y3D8 172 aaKnown RBP20.27■□□□□ 0.84
CCDC47-204ENST00000582252 ACOD1A6NK06 481 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 OR4C45A6NMZ5 311 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 CDRT15L2A8MXV6 281 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 RPS27P42677 84 aaKnown RBP20.27■□□□□ 0.83
CCDC47-204ENST00000582252 PITPNBP48739 271 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 BIDP55957 195 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 SLC35A1P78382 337 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 TEX30Q5JUR7 227 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 PYHIN1Q6K0P9 492 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 OR52N5Q8NH56 324 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 TXNDC15Q96J42 360 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 C4orf45Q96LM5 186 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 BRD7Q9NPI1 651 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 KLHL9Q9P2J3 617 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 SPATA2Q9UM82 520 aa20.27■□□□□ 0.83
CCDC47-204ENST00000582252 AQP8O94778 261 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 HRGP04196 525 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 EIF4EP06730 217 aaKnown RBP20.26■□□□□ 0.83
CCDC47-204ENST00000582252 CCL3P10147 92 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 PRKAR1AP10644 381 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 LIFP15018 202 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 ATF1P18846 271 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 TCEA1P23193 301 aaKnown RBP20.26■□□□□ 0.83
CCDC47-204ENST00000582252 DPP4P27487 766 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 CD97P48960 835 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 ETFDHQ16134 617 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 LRRN1Q6UXK5 716 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.26■□□□□ 0.83
CCDC47-204ENST00000582252 SLC26A10Q8NG04 563 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 ZNF671Q8TAW3 534 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 TMEM41AQ96HV5 264 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 KCNJ15Q99712 375 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 MED29Q9NX70 200 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 DKKL1Q9UK85 242 aa20.26■□□□□ 0.83
CCDC47-204ENST00000582252 BOLA2-SMG1P6H3BVE0 249 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 GPR171O14626 319 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 PIN1P1O15428 100 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 NR4A2P43354 598 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 PITPNAQ00169 270 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 THEM4Q5T1C6 240 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 HACD4Q5VWC8 232 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 LRRC69Q6ZNQ3 347 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms