RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 FAM46AQ96IP4 442 aaKnown RBP16.82■□□□□ 0.28
SREBF1-220ENST00000581707 TSPAN32Q96QS1 320 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 RAB1BQ9H0U4 201 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 KCNN2Q9H2S1 579 aa16.82■□□□□ 0.28
SREBF1-220ENST00000581707 ARPC2O15144 300 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 PTHP01270 115 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 TP53P04637 393 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-220ENST00000581707 EVX1P49640 407 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 PDLIM4P50479 330 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 RPS23P62266 143 aaKnown RBP16.81■□□□□ 0.28
SREBF1-220ENST00000581707 ERVK-25P63136 954 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 PPP2R2BQ00005 443 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 PLP2Q04941 152 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 MSMPQ1L6U9 139 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 KRTAP21-3Q3LHN1 58 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 SPATS1Q496A3 300 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 FITM2Q8N6M3 262 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 CLDN22Q8N7P3 220 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 MRPL24Q96A35 216 aaKnown RBP16.81■□□□□ 0.28
SREBF1-220ENST00000581707 NABP1Q96AH0 204 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 DHRS1Q96LJ7 313 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 NSMCE2Q96MF7 247 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 NDEL1Q9GZM8 345 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 C1orf198Q9H425 327 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 DYNLRB1Q9NP97 96 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 GRHPRQ9UBQ7 328 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 SLC7A8Q9UHI5 535 aa16.81■□□□□ 0.28
SREBF1-220ENST00000581707 SONP18583 2426 aaKnown RBP16.81■□□□□ 0.28
SREBF1-220ENST00000581707 A0A096LNT2 108 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 TRBV4-1A0A0J9YWV2 114 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 IQCMA0A1B0GVH7 501 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 ERCC1P07992 297 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-220ENST00000581707 CD14P08571 375 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 MMP7P09237 267 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-220ENST00000581707 ZNF26P17031 533 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-220ENST00000581707 OMPP47874 163 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 SMIM11AP58511 58 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 SEC23BQ15437 767 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 IQCCQ4KMZ1 466 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 ZCCHC24Q8N2G6 241 aaKnown RBP16.8■□□□□ 0.28
SREBF1-220ENST00000581707 OR1J2Q8NGS2 313 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 OR52J3Q8NH60 311 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 MRPL37Q9BZE1 423 aaKnown RBP16.8■□□□□ 0.28
SREBF1-220ENST00000581707 CDH20Q9HBT6 801 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 CCNB1IP1Q9NPC3 277 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 KRCC1Q9NPI7 259 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-220ENST00000581707 ADAM18Q9Y3Q7 739 aa16.8■□□□□ 0.28
SREBF1-220ENST00000581707 CHD3Q12873 2000 aaKnown RBP16.79■□□□□ 0.28
SREBF1-220ENST00000581707 SLC22A23A1A5C7 686 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 INAFM1C9JVW0 142 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 PTP4A3O75365 173 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 FAM107AO95990 144 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 SEMG1P04279 462 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 ADRA2AP08913 450 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 CCL2P13500 99 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 GUCA1AP43080 201 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-220ENST00000581707 LIMS1P48059 325 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 HSF2Q03933 536 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 LOXL1Q08397 574 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-220ENST00000581707 TBC1D28Q2M2D7 210 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 FAM27BQ5VT28 67 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 PAQR4Q8N4S7 273 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-220ENST00000581707 NEU4Q8WWR8 484 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-220ENST00000581707 MCUR1Q96AQ8 359 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 NSL1Q96IY1 281 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 Q96M85 177 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 FUZQ9BT04 418 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 LRMDAQ9H2I8 198 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 MYOZ1Q9NP98 299 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-220ENST00000581707 AURKCQ9UQB9 309 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 SIGLEC7Q9Y286 467 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 JMJD1CQ15652 2540 aa16.79■□□□□ 0.28
SREBF1-220ENST00000581707 YLPM1P49750 1951 aaKnown RBP16.78■□□□□ 0.28
SREBF1-220ENST00000581707 B2RBV5 119 aa16.78■□□□□ 0.28
SREBF1-220ENST00000581707 NDUFS8O00217 210 aa16.78■□□□□ 0.28
SREBF1-220ENST00000581707 XKRYO14609 159 aa16.78■□□□□ 0.28
SREBF1-220ENST00000581707 SYNGR3O43761 229 aa16.78■□□□□ 0.28
SREBF1-220ENST00000581707 NDUFB2O95178 105 aa16.78■□□□□ 0.28
SREBF1-220ENST00000581707 GADD45GO95257 159 aa16.78■□□□□ 0.28
SREBF1-220ENST00000581707 APEX1P27695 318 aaKnown RBP16.78■□□□□ 0.28
SREBF1-220ENST00000581707 CARTPTQ16568 116 aa16.78■□□□□ 0.28
SREBF1-220ENST00000581707 PABPC1L2AQ5JQF8 200 aa16.78■□□□□ 0.28
SREBF1-220ENST00000581707 SYT3Q9BQG1 590 aa16.78■□□□□ 0.28
SREBF1-220ENST00000581707 FZR1Q9UM11 496 aa16.78■□□□□ 0.28
SREBF1-220ENST00000581707 LOC390937A0A1W2PQ73 354 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 H7C1C5 153 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 AHCYL1O43865 530 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 CD5LO43866 347 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 SNAP29O95721 258 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 IGFBP1P08833 259 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-220ENST00000581707 FAM157BP0CG42 384 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 ZNF32P17041 273 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 LAP3P28838 519 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 APLNRP35414 380 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 LCN6P62502 163 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 SPIBQ01892 262 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 FAM122BQ7Z309 247 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 LRP11Q86VZ4 500 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 CCDC197Q8NCU1 140 aa16.77■□□□□ 0.28
SREBF1-220ENST00000581707 CPEB3Q8NE35 698 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms