RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 CDAP32320 146 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 RPL4P36578 427 aaKnown RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 EVX1P49640 407 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 RPS23P62266 143 aaKnown RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 GKAP1Q5VSY0 366 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 FITM2Q8N6M3 262 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 ARIH2OSQ8N7S6 290 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 SLC30A7Q8NEW0 376 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 MRPL24Q96A35 216 aaKnown RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 FAM46AQ96IP4 442 aaKnown RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 NDEL1Q9GZM8 345 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 RAB1BQ9H0U4 201 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 MYOZ1Q9NP98 299 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 KRCC1Q9NPI7 259 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 GRHPRQ9UBQ7 328 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 V9GYQ6 96 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 FN1P02751 2386 aaKnown RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 HIVEP2P31629 2446 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 TRBV4-1A0A0J9YWV2 114 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 IQCMA0A1B0GVH7 501 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 SLC22A23A1A5C7 686 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 NDUFS8O00217 210 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 PTP4A3O75365 173 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 DIRAS1O95057 198 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 FAM107AO95990 144 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 TP53P04637 393 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 CD14P08571 375 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 ZNF26P17031 533 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 OMPP47874 163 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 LIMS1P48059 325 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 PDLIM4P50479 330 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 SMIM11AP58511 58 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 ERVK-25P63136 954 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 PPP2R2BQ00005 443 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 PLP2Q04941 152 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 LOXL1Q08397 574 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 MSMPQ1L6U9 139 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 TBC1D28Q2M2D7 210 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 FOXL2NBQ6ZUU3 175 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 CLDN22Q8N7P3 220 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 OR1J2Q8NGS2 313 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 MCUR1Q96AQ8 359 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 FUZQ9BT04 418 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 MRPL37Q9BZE1 423 aaKnown RBP12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 CCNB1IP1Q9NPC3 277 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 AURKCQ9UQB9 309 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 SIGLEC7Q9Y286 467 aa12.11□□□□□ -0.47
SUPT4H1-205ENST00000581166 SH3PXD2BA1X283 911 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 B2RBV5 119 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 XKRYO14609 159 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 AHCYL1O43865 530 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 NDUFB2O95178 105 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 SNAP29O95721 258 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 ERCC1P07992 297 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 PCSK6P29122 969 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 GUCA1AP43080 201 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 SEC23BQ15437 767 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 SGCAQ16586 387 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 FAM27BQ5VT28 67 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 FAM122BQ7Z309 247 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 OR52J3Q8NH60 311 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 NEU4Q8WWR8 484 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 NSL1Q96IY1 281 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 GPX7Q96SL4 187 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 LRMDAQ9H2I8 198 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 CDH20Q9HBT6 801 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 DYNLRB1Q9NP97 96 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 ADAM18Q9Y3Q7 739 aa12.1□□□□□ -0.47
SUPT4H1-205ENST00000581166 LOC390937A0A1W2PQ73 354 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 VWC2LB2RUY7 222 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 INAFM1C9JVW0 142 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 SYNGR3O43761 229 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 TLX2O43763 284 aaPredicted RBP12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 CD5LO43866 347 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 GADD45GO95257 159 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 FABP3P05413 133 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 IGFBP1P08833 259 aaPredicted RBP12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 ADRA2AP08913 450 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 CST2P09228 141 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 CCL2P13500 99 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 ZNF32P17041 273 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 APLNRP35414 380 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 SPIBQ01892 262 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 HSF2Q03933 536 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 MESTQ5EB52 335 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 PABPC1L2AQ5JQF8 200 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 ARHGAP24Q8N264 748 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 ZCCHC24Q8N2G6 241 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 PAQR4Q8N4S7 273 aaPredicted RBP12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 CCDC197Q8NCU1 140 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 CPEB3Q8NE35 698 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 RSRC1Q96IZ7 334 aaKnown RBP12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 Q96M85 177 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 ZNF570Q96NI8 536 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 PIMREGQ9BSJ6 248 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 MS4A5Q9H3V2 200 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 IL1RAPQ9NPH3 570 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 NRIP3Q9NQ35 241 aa12.09□□□□□ -0.47
SUPT4H1-205ENST00000581166 ABCA1O95477 2261 aa12.08□□□□□ -0.48
SUPT4H1-205ENST00000581166 PRSS37A4D1T9 235 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms