RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CEACAM19Q7Z692 300 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SLC38A6Q8IZM9 456 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FADS6Q8N9I5 356 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR4M2Q8NGB6 313 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR1J4Q8NGS1 313 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LILRB1Q8NHL6 650 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZNRF4Q8WWF5 429 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TMEM234Q8WY98 164 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SNAPC3Q92966 411 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SGCZQ96LD1 299 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 WACQ9BTA9 647 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TMUB1Q9BVT8 246 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 RNF121Q9H920 327 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GNG8Q9UK08 70 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 POLHQ9Y253 713 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 NCOR2Q9Y618 2525 aa11.39□□□□□ -0.59
CDK5RAP3-217ENST00000580287 H0YC42 278 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SMLR1H3BR10 107 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 KLK10O43240 276 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 NPIPB7O75200 414 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PLGP00747 810 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ASAH2BP0C7U1 165 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ELK1P19419 428 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 KLK2P20151 261 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 AHCYP23526 432 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 DPP4P27487 766 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CTXN1P60606 82 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PRPS1P60891 318 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 BDH1Q02338 343 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FAPQ12884 760 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SNTA1Q13424 505 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ALG10Q5BKT4 473 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TIGD3Q6B0B8 471 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ASB18Q6ZVZ8 466 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 YRDCQ86U90 279 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TCTE3Q8IZS6 198 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 YIPF7Q8N8F6 280 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR5H6Q8NGV6 325 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TSSK2Q96PF2 358 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TEKT2Q9UIF3 430 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZNF346Q9UL40 294 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 IGLV3-32A0A0A0MS00 114 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 A8MVM7 634 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 H7C1C5 153 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZIC3O60481 467 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR3A3P47888 321 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LCN6P62502 163 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PPP3R1P63098 170 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 RPL18Q07020 188 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 DEFB109BQ30KR1 87 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LCN1P1Q5VSP4 162 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LIX1LQ8IVB5 337 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SLC35F2Q8IXU6 374 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FAM109AQ8N4B1 249 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ST8SIA1Q92185 356 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SLC19A3Q9BZV2 496 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PPP1R3EQ9H7J1 279 aa11.38□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MAP1BP46821 2468 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 A0A087WV48 116 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TLX3O43711 291 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 BGLAPP02818 100 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 HIST1H2ABP04908 130 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SPI1P17947 270 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ERP29P30040 261 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MAGEB1P43366 347 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR1C1Q15619 314 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR7A5Q15622 319 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 IGF2-ASQ6U949 168 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 HIST3H2AQ7L7L0 130 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 NPEPL1Q8NDH3 523 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 FDCSPQ8NFU4 85 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ENKURQ8TC29 256 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GHSRQ92847 366 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 HIST1H2ACQ93077 130 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 UTP23Q9BRU9 249 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PTGES2Q9H7Z7 377 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 NRIP3Q9NQ35 241 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 HAO2Q9NYQ3 351 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TAS2R5Q9NYW4 299 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 GTF2A1LQ9UNN4 478 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PIEZO2Q9H5I5 2752 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TRAV36DV7A0A075B6V5 113 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 HLA-DOBP13765 273 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 HLA-DMAP28067 261 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MSX1P28360 303 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 PSMB10P40306 273 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TAS2R43P59537 309 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SLC25A35Q3KQZ1 300 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 RAET1LQ5VY80 246 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 TRIQKQ629K1 86 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 MZT2AQ6P582 158 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ESPNLQ6ZVH7 1005 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SLC43A2Q8N370 569 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 OR4M1Q8NGD0 313 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZNF417Q8TAU3 575 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ABHD4Q8TB40 342 aa11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 ZNF587Q96SQ5 575 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 SRA1Q9HD15 236 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-217ENST00000580287 CHD8Q9HCK8 2581 aa11.36□□□□□ -0.59
CDK5RAP3-217ENST00000580287 LRRC3CA6NJW4 275 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms