RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 CDAP32320 146 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 SLC34A1Q06495 639 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 SNAPC1Q16533 368 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 FOXL2NBQ6ZUU3 175 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 DPPA2Q7Z7J5 298 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 ZBTB46Q86UZ6 589 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 GLB1L2Q8IW92 636 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 SKA3Q8IX90 412 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 OR6V1Q8N148 313 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 CYB561A3Q8NBI2 242 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 OR2T4Q8NH00 348 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 TSSK2Q96PF2 358 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 SH3GL3Q99963 347 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 GABARAPL3Q9BY60 117 aa13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 GCN1Q92616 2671 aaKnown RBP13.61□□□□□ -0.23
SLC6A4-205ENST00000579221 PRR23D1E9PI22 279 aaPredicted RBP13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 UBL3O95164 117 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 PRR23D2P0DMB1 279 aaPredicted RBP13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 POLR2IP36954 125 aaKnown RBP13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 SLC25A1P53007 311 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 CRMP1Q14194 572 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 LRRC36Q1X8D7 754 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 ZIK1Q3SY52 487 aaPredicted RBP13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 FREM1Q5H8C1 2179 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 BEX5Q5H9J7 111 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 FAM27BQ5VT28 67 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 SLX4IPQ5VYV7 408 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 LPCAT4Q643R3 524 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 HIST2H2BCQ6DN03 193 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 SLC16A14Q7RTX9 510 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 LRRC18Q8N456 261 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 MARVELD3Q96A59 401 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 OTULINQ96BN8 352 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 WACQ9BTA9 647 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 C1QTNF6Q9BXI9 259 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 RACGAP1Q9H0H5 632 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 FN3KQ9H479 309 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 RNF121Q9H920 327 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 RNPEPL1Q9HAU8 725 aa13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 NKX1-2Q9UD57 310 aaPredicted RBP13.6□□□□□ -0.23
SLC6A4-205ENST00000579221 IGLV1-36A0A0B4J1U3 117 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 A6NNC1 897 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 CASQ2O14958 399 aaPredicted RBP13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 HLA-HP01893 362 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 CBR1P16152 277 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 MSR1P21757 451 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 ARR3P36575 388 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 ZNF83P51522 516 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 NR1H2P55055 460 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 RAB1AP62820 205 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 TUBA1BP68363 451 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 TUBA4AP68366 448 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 GLO1Q04760 184 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 GSG1Q2KHT4 349 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 SLC36A2Q495M3 483 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 FBXW10Q5XX13 1052 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 C12orf73Q69YU5 71 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 TMEM53Q6P2H8 277 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 TUBA1AQ71U36 451 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 GALNT4Q8N4A0 578 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 PACRGLQ8N7B6 248 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 FAM169BQ8N8A8 192 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 PTP4A1Q93096 173 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 NABP1Q96AH0 204 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 C14orf79Q96F83 325 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 ESRP2Q9H6T0 727 aaKnown RBP13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 CCNB1IP1Q9NPC3 277 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 POLE4Q9NR33 117 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 B3GNT2Q9NY97 397 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 CACNA1CQ13936 2221 aa13.59□□□□□ -0.23
SLC6A4-205ENST00000579221 C12orf71A8MTZ7 269 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 FAM171A2A8MVW0 826 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 M0R1B8 84 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 DCTN6O00399 190 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 HLA-DQA2P01906 255 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 CST2P09228 141 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 PTAFRP25105 342 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 EPHA2P29317 976 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 SSTR2P30874 369 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 PTDSS1P48651 473 aaKnown RBP13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 BLVRAP53004 296 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 PCBD1P61457 104 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 LSM6P62312 80 aaKnown RBP13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 HSF2Q03933 536 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 PIGFQ07326 219 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 RIPK1Q13546 671 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 KCNMB1Q16558 191 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 C3orf36Q3SXR2 165 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 OGFRL1Q5TC84 451 aaPredicted RBP13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 ZNF787Q6DD87 383 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 TMEM108Q6UXF1 575 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 SYT9Q86SS6 491 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 CPOQ8IVL8 374 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 ZNF295-AS1Q8N0V1 137 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 PROKR2Q8NFJ6 384 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 OR9Q1Q8NGQ5 310 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 HTRA1Q92743 480 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 PIK3IP1Q96FE7 263 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 PLPPR2Q96GM1 343 aa13.58□□□□□ -0.24
SLC6A4-205ENST00000579221 RDH12Q96NR8 316 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms