RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 NOTCH2Q04721 2471 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 ABCA4P78363 2273 aa6.93□□□□□ -1.3
CCDC40-215ENST00000576033 NAV2Q8IVL1 2488 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.92□□□□□ -1.3
CCDC40-215ENST00000576033 UNC119BA6NIH7 251 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 A6NNC1 897 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 XPNPEP2O43895 674 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 MPZL2O60487 215 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 VAMP5O95183 116 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 HRGP04196 525 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 HIST1H2ABP04908 130 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 SCG5P05408 212 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 B4GALT1P15291 398 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 FMO3P31513 532 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 IFNA8P32881 189 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 ACVR1BP36896 505 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 IFNGR2P38484 337 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 SLC15A1P46059 708 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 CSNK1A1P48729 337 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF83P51522 516 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 ARF1P84077 181 aaKnown RBP6.92□□□□□ -1.3
CCDC40-215ENST00000576033 CDK5Q00535 292 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 ZP4Q12836 540 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 IRF3Q14653 427 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 ETFDHQ16134 617 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 CNPY1Q3B7I2 92 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF620Q6ZNG0 422 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 RASSF6Q6ZTQ3 369 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 PTCHD4Q6ZW05 846 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 KCTD8Q6ZWB6 473 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 TMPRSS11FQ6ZWK6 438 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 HIST3H2AQ7L7L0 130 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 FAM122BQ7Z309 247 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 PXKQ7Z7A4 578 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 RNF113BQ8IZP6 322 aaKnown RBP6.92□□□□□ -1.3
CCDC40-215ENST00000576033 IQCF1Q8N6M8 205 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 ANKK1Q8NFD2 765 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 KBTBD8Q8NFY9 601 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 OR1K1Q8NGR3 316 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 OR4Q3Q8NH05 313 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 FAM81AQ8TBF8 368 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 GNPDA2Q8TDQ7 276 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 LIPHQ8WWY8 451 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 NSMAFQ92636 917 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 HIST1H2ACQ93077 130 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 TMEM54Q969K7 222 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 MUL1Q969V5 352 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 PIK3IP1Q96FE7 263 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 POLDIP3Q9BY77 421 aaKnown RBP6.92□□□□□ -1.3
CCDC40-215ENST00000576033 ULBP2Q9BZM5 246 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 FANCFQ9NPI8 374 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 TAS2R16Q9NYV7 291 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 IL20Q9NYY1 176 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF224Q9NZL3 707 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 AASSQ9UDR5 926 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 PSORS1C1Q9UIG5 152 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 RCE1Q9Y256 329 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 TPRKBQ9Y3C4 175 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 CADP27708 2225 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 ROS1P08922 2347 aa6.92□□□□□ -1.3
CCDC40-215ENST00000576033 LOC102725191A0A1B0GVB3 256 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 CIB4A0PJX0 185 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 OR5H1A6NKK0 313 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF587BE7ETH6 402 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 M0R129 80 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 PTP4A3O75365 173 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 CTAG2O75638 210 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 KRT33AO76009 404 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 IGF2P01344 180 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 IGHMP01871 453 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 EPXP11678 715 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 PSKH1P11801 424 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 PIPP12273 146 aaPredicted RBP6.91□□□□□ -1.3
CCDC40-215ENST00000576033 CRYGSP22914 178 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 DCKP27707 260 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 MPGP29372 298 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 RPL4P36578 427 aaKnown RBP6.91□□□□□ -1.3
CCDC40-215ENST00000576033 CLRN1P58418 232 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 CDC42P60953 191 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 MVKQ03426 396 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 BSPH1Q075Z2 132 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 RAB39AQ14964 217 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 MFSD13AQ14CX5 517 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 OCLNQ16625 522 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 SMN1Q16637 294 aaKnown RBP6.91□□□□□ -1.3
CCDC40-215ENST00000576033 TBRG1Q3YBR2 411 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 ADAM5Q6NVV9 412 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 LRFN4Q6PJG9 635 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 LYPD4Q6UWN0 246 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 B3GLCTQ6Y288 498 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 PRSS48Q7RTY5 328 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 GPR137CQ8N3F9 429 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 SDR9C7Q8NEX9 313 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 BPIFB6Q8NFQ5 453 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 OR6N1Q8NGY5 312 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 OR6X1Q8NH79 312 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 ZNF420Q8TAQ5 688 aaPredicted RBP6.91□□□□□ -1.3
CCDC40-215ENST00000576033 ZNRF4Q8WWF5 429 aa6.91□□□□□ -1.3
CCDC40-215ENST00000576033 NMD3Q96D46 503 aaKnown RBP6.91□□□□□ -1.3
CCDC40-215ENST00000576033 PLPPR2Q96GM1 343 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms