RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 FAM171A2A8MVW0 826 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 E9PQ18 207 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 M0R129 80 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 GPANK1O95872 356 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 SCG5P05408 212 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 THBDP07204 575 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 CLUP10909 449 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 ZNF3P17036 446 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 COL8A1P27658 744 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 CRABP1P29762 137 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 PYCR1P32322 319 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 SH3BGRP55822 239 aaPredicted RBP7.5□□□□□ -1.21
NUP88-211ENST00000575976 TUBA1BP68363 451 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 TUBA4AP68366 448 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 TAB1Q15750 504 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 SNAPC1Q16533 368 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 TIMM23BQ5SRD1 257 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 OTPQ5XKR4 325 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 ZNF787Q6DD87 383 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 OR7E24Q6IFN5 339 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 ANKRD16Q6P6B7 361 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 DNM1P34Q6PK57 102 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 MEX3BQ6ZN04 569 aaKnown RBP7.5□□□□□ -1.21
NUP88-211ENST00000575976 ZNF813Q6ZN06 617 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 FOXL2NBQ6ZUU3 175 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 TUBA1AQ71U36 451 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 ZNF627Q7L945 461 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 DMRTC2Q8IXT2 367 aaPredicted RBP7.5□□□□□ -1.21
NUP88-211ENST00000575976 SLC22A24Q8N4F4 322 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 PACRGLQ8N7B6 248 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 ACBD4Q8NC06 268 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 OR9Q1Q8NGQ5 310 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 OR52N5Q8NH56 324 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 ZNRF4Q8WWF5 429 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 PTP4A1Q93096 173 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 NABP1Q96AH0 204 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 OTULINQ96BN8 352 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 ZC3HAV1LQ96H79 300 aaKnown RBP7.5□□□□□ -1.21
NUP88-211ENST00000575976 BOD1Q96IK1 185 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 SLC38A2Q96QD8 506 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 HCAR1Q9BXC0 346 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 TEX12Q9BXU0 123 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 GRIP2Q9C0E4 1043 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 MED20Q9H944 212 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 SEC61A2Q9H9S3 476 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 HINT3Q9NQE9 182 aaKnown RBP7.5□□□□□ -1.21
NUP88-211ENST00000575976 C8orf4Q9NR00 106 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 SMPD3Q9NY59 655 aaPredicted RBP7.5□□□□□ -1.21
NUP88-211ENST00000575976 NDRG3Q9UGV2 375 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 FKBP7Q9Y680 259 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 HCFC1P51610 2035 aa7.5□□□□□ -1.21
NUP88-211ENST00000575976 SH3D21A4FU49 640 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 ZNF503-AS2A6NEH8 195 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 PRR23D1E9PI22 279 aaPredicted RBP7.49□□□□□ -1.21
NUP88-211ENST00000575976 PRKYO43930 277 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 MPZL1O95297 269 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 GYPBP06028 91 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 PRR23D2P0DMB1 279 aaPredicted RBP7.49□□□□□ -1.21
NUP88-211ENST00000575976 OR8G3PP0DMU2 310 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 B4GALT1P15291 398 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 PPP3CBP16298 524 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 LAP3P28838 519 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 GGT2P36268 569 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 PEX19P40855 299 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 KIR2DL3P43628 341 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 CENPAP49450 140 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 SLC25A1P53007 311 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 UBE2NP61088 152 aaKnown RBP7.49□□□□□ -1.21
NUP88-211ENST00000575976 MRPS34P82930 218 aaKnown RBP7.49□□□□□ -1.21
NUP88-211ENST00000575976 EFNB1P98172 346 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 SGCAQ16586 387 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 ALKBH2Q6NS38 261 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 PLBD1Q6P4A8 553 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 UGT2A3Q6UWM9 527 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 ZBTB46Q86UZ6 589 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 P2RY8Q86VZ1 359 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 WFDC8Q8IUA0 241 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 CPOQ8IVL8 374 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 SKA3Q8IX90 412 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 LRRC18Q8N456 261 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 C17orf78Q8N4C9 275 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 TCEANCQ8N8B7 351 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 OR51L1Q8NGJ5 315 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 OR2T4Q8NH00 348 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 FGFBP3Q8TAT2 258 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 UBE2FQ969M7 185 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 PLEKHA8Q96JA3 519 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 HRASLS5Q96KN8 279 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 RDH12Q96NR8 316 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 DACH2Q96NX9 599 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 SH3GL3Q99963 347 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 SPOCK3Q9BQ16 436 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 USB1Q9BQ65 265 aaKnown RBP7.49□□□□□ -1.21
NUP88-211ENST00000575976 MED18Q9BUE0 208 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 NMNAT2Q9BZQ4 307 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 RACGAP1Q9H0H5 632 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 OR51V1Q9H2C8 321 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 POLE4Q9NR33 117 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 FAM118AQ9NWS6 357 aa7.49□□□□□ -1.21
NUP88-211ENST00000575976 CRIM1Q9NZV1 1036 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms