RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 OR9Q2Q8NGE9 314 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 GNPDA2Q8TDQ7 276 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 IGFBPL1Q8WX77 278 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 DNAJC9Q8WXX5 260 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 NANOS1Q8WY41 292 aaKnown RBP11.54□□□□□ -0.56
RPAIN-216ENST00000575599 HTRA1Q92743 480 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 HDAC2Q92769 488 aaKnown RBP11.54□□□□□ -0.56
RPAIN-216ENST00000575599 MCHR2Q969V1 340 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 GTPBP3Q969Y2 492 aaKnown RBP11.54□□□□□ -0.56
RPAIN-216ENST00000575599 FEVQ99581 238 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 GABARAPL1Q9H0R8 117 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 SMURF2Q9HAU4 748 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 MOV10Q9HCE1 1003 aaKnown RBP11.54□□□□□ -0.56
RPAIN-216ENST00000575599 KRT84Q9NSB2 600 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 CRNNQ9UBG3 495 aaPredicted RBP11.54□□□□□ -0.56
RPAIN-216ENST00000575599 ENOPH1Q9UHY7 261 aa11.54□□□□□ -0.56
RPAIN-216ENST00000575599 HEATR1Q9H583 2144 aaKnown RBP11.53□□□□□ -0.56
RPAIN-216ENST00000575599 NPIPB13A6NJU9 1138 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 NPIPB4C9JG80 1138 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 SLC2A10O95528 541 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 IGKV3-15P01624 115 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 IGLV1-44P01699 117 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 IGHMP01871 453 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 CRYAAP02489 173 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 CBR1P16152 277 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 IGFBP5P24593 272 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 ARR3P36575 388 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 ACVR1BP36896 505 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 OMPP47874 163 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 FABP6P51161 128 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 ZNF84P51523 738 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 RPL27P61353 136 aaKnown RBP11.53□□□□□ -0.56
RPAIN-216ENST00000575599 NAAAQ02083 359 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 FMODQ06828 376 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 FHL1Q13642 323 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 TAF11Q15544 211 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 GSG1Q2KHT4 349 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 RFX4Q33E94 735 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 ANKDD1AQ495B1 522 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 ZBED5Q49AG3 693 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 IZUMO2Q6UXV1 221 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 ZNF627Q7L945 461 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 TGIF2LYQ8IUE0 185 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 KRTAP1-3Q8IUG1 177 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 CCDC36Q8IYA8 594 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 FBXL14Q8N1E6 418 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 CLDN22Q8N7P3 220 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 LRRC75AQ8NAA5 344 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 TSPAN32Q96QS1 320 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 SLC29A1Q99808 456 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 DHRS9Q9BPW9 319 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 KATNB1Q9BVA0 655 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 MRPL13Q9BYD1 178 aaKnown RBP11.53□□□□□ -0.56
RPAIN-216ENST00000575599 GSX2Q9BZM3 304 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 NDEL1Q9GZM8 345 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 NOX3Q9HBY0 568 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 PAPOLBQ9NRJ5 636 aaKnown RBP11.53□□□□□ -0.56
RPAIN-216ENST00000575599 TMEM38BQ9NVV0 291 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 USE1Q9NZ43 259 aa11.53□□□□□ -0.56
RPAIN-216ENST00000575599 ZNF346Q9UL40 294 aaKnown RBP11.53□□□□□ -0.56
RPAIN-216ENST00000575599 CELSR1Q9NYQ6 3014 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 CENPBD1B2RD01 187 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 ARHGEF9O43307 516 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 FARS2O95363 451 aaKnown RBP11.52□□□□□ -0.57
RPAIN-216ENST00000575599 RAB36O95755 333 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 GASTP01350 101 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 PATE4P0C8F1 98 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 GSTM3P21266 225 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 CALCRP30988 508 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 TTKP33981 857 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 GIPRP48546 466 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 HSPA13P48723 471 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 ATP5J2P56134 94 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 ERVK-25P63136 954 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 HIST3H3Q16695 136 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 C3orf36Q3SXR2 165 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 AGAP6Q5VW22 663 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 SHEQ5VZ18 495 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 PGBD2Q6P3X8 592 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 SKA3Q8IX90 412 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 MUC15Q8N387 334 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 SLC22A24Q8N4F4 322 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 FAM169BQ8N8A8 192 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 NSMAFQ92636 917 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 SH3GL3Q99963 347 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 FUZQ9BT04 418 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 TRAF4Q9BUZ4 470 aaPredicted RBP11.52□□□□□ -0.57
RPAIN-216ENST00000575599 SMPD3Q9NY59 655 aaPredicted RBP11.52□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF224Q9NZL3 707 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 IL20RAQ9UHF4 553 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 ADAM18Q9Y3Q7 739 aa11.52□□□□□ -0.57
RPAIN-216ENST00000575599 F8P00451 2351 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 VPS13CQ709C8 3753 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 IGKV1D-43A0A0B4J1Z2 117 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 UNC119BA6NIH7 251 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 H0YJX3 145 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 H7C1C5 153 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 TMCC2O75069 709 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 UBL3O95164 117 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 CD8AP01732 235 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms