RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 TSSK6Q9BXA6 273 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 CCNB1IP1Q9NPC3 277 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 B3GNT2Q9NY97 397 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 CISD1Q9NZ45 108 aaKnown RBP13.25□□□□□ -0.29
LITAF-217ENST00000575426 KIF17Q9P2E2 1029 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 CRNNQ9UBG3 495 aaPredicted RBP13.25□□□□□ -0.29
LITAF-217ENST00000575426 BAIAP2Q9UQB8 552 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 PLEKHA6Q9Y2H5 1048 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 ATP23Q9Y6H3 246 aa13.25□□□□□ -0.29
LITAF-217ENST00000575426 NAV2Q8IVL1 2488 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 IGKV1D-43A0A0B4J1Z2 117 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 SHISA9B4DS77 424 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 H3BN98 237 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 SLC16A7O60669 478 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 IGKV3-15P01624 115 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 CECR9P0C854 216 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 CRABP1P29762 137 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 CDKN2AP42771 156 aaKnown RBP13.24□□□□□ -0.29
LITAF-217ENST00000575426 CENPAP49450 140 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 PLP2Q04941 152 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 ATP6AP1Q15904 470 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 LEG1Q6P5S2 330 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 SHQ1Q6PI26 577 aaKnown RBP13.24□□□□□ -0.29
LITAF-217ENST00000575426 CD300LDQ6UXZ3 194 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 HIPK1Q86Z02 1210 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 ZNF611Q8N823 705 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 ATG16L2Q8NAA4 619 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 OR4K13Q8NH42 304 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 TEX47Q8TBZ9 253 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 PIGTQ969N2 578 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 SYT4Q9H2B2 425 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 FAIMQ9NVQ4 179 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 VSX1Q9NZR4 365 aaPredicted RBP13.24□□□□□ -0.29
LITAF-217ENST00000575426 ITGB1BP2Q9UKP3 347 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 MOKQ9UQ07 419 aa13.24□□□□□ -0.29
LITAF-217ENST00000575426 PDZD2O15018 2839 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 ZNF503-AS2A6NEH8 195 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 SOX14O95416 240 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 PTHP01270 115 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 IGLV1-44P01699 117 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 PATE4P0C8F1 98 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 HIST1H1CP16403 213 aaKnown RBP13.23□□□□□ -0.29
LITAF-217ENST00000575426 PRKACGP22612 351 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 GIPRP48546 466 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 ACTR3P61158 418 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 NAAAQ02083 359 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.23□□□□□ -0.29
LITAF-217ENST00000575426 SPOCK1Q08629 439 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 KPNB1Q14974 876 aaKnown RBP13.23□□□□□ -0.29
LITAF-217ENST00000575426 SLC35F1Q5T1Q4 408 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 PTCHD4Q6ZW05 846 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 HS3ST5Q8IZT8 346 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 OR2T33Q8NG76 320 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 OR52E2Q8NGJ4 325 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 LILRB1Q8NHL6 650 aaPredicted RBP13.23□□□□□ -0.29
LITAF-217ENST00000575426 HTRA1Q92743 480 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 NEUROG1Q92886 237 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 SNX18Q96RF0 628 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 CCL19Q99731 98 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 NTN4Q9HB63 628 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 UGT2A1Q9Y4X1 527 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 POLQO75417 2590 aa13.23□□□□□ -0.29
LITAF-217ENST00000575426 IQCMA0A1B0GVH7 501 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 VSTM5A8MXK1 200 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 ATP6V1G2-DDX39BF2Z307 99 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 G3V2T6 193 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 BHLHE40O14503 412 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 CELA3BP08861 270 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 ZNF23P17027 643 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 MSR1P21757 451 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 POU1F1P28069 291 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 LAP3P28838 519 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 PCBD1P61457 104 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 HSF2Q03933 536 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 RAB39AQ14964 217 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 ETFDHQ16134 617 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 FAM27BQ5VT28 67 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 ZFP1Q6P2D0 407 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 ZDHHC13Q8IUH4 622 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 GLB1L2Q8IW92 636 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 FBXL14Q8N1E6 418 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 LNX2Q8N448 690 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 SDR9C7Q8NEX9 313 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 OR4F15Q8NGB8 312 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 SMAP2Q8WU79 429 aaPredicted RBP13.22□□□□□ -0.29
LITAF-217ENST00000575426 TMEM171Q8WVE6 324 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 PYDC1Q8WXC3 89 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 DNAJC9Q8WXX5 260 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 LRTOMTQ8WZ04 291 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 NMNAT3Q96T66 252 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 WACQ9BTA9 647 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 TEX12Q9BXU0 123 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 PLA2G12AQ9BZM1 189 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 NUAK2Q9H093 628 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 SRA1Q9HD15 236 aaKnown RBP13.22□□□□□ -0.29
LITAF-217ENST00000575426 ZNF224Q9NZL3 707 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 KLHL21Q9UJP4 597 aa13.22□□□□□ -0.29
LITAF-217ENST00000575426 COA3Q9Y2R0 106 aaPredicted RBP13.22□□□□□ -0.29
LITAF-217ENST00000575426 SPEF1Q9Y4P9 236 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms