RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 KLHL24Q6TFL4 600 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 CXXC5Q7LFL8 322 aaKnown RBP14.98□□□□□ -0.01
NUP88-210ENST00000574867 DEPDC4Q8N2C3 294 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 PROKR2Q8NFJ6 384 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 OR8J1Q8NGP2 316 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 OR9Q1Q8NGQ5 310 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 NELFAQ9H3P2 528 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 SLC24A3Q9HC58 644 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 SRA1Q9HD15 236 aaKnown RBP14.98□□□□□ -0.01
NUP88-210ENST00000574867 HINT3Q9NQE9 182 aaKnown RBP14.98□□□□□ -0.01
NUP88-210ENST00000574867 NDRG3Q9UGV2 375 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 AMDHD2Q9Y303 409 aa14.98□□□□□ -0.01
NUP88-210ENST00000574867 FAM183AA6NL82 134 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 DCTN6O00399 190 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 PRODHO43272 600 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 SEC14L2O76054 403 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 OR8G3PP0DMU2 310 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 SPI1P17947 270 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 LAP3P28838 519 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 EFNB1P98172 346 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 PLBD1Q6P4A8 553 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 SLC22A24Q8N4F4 322 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 DHRSXQ8N5I4 330 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 TRUB1Q8WWH5 349 aaKnown RBP14.97□□□□□ -0.01
NUP88-210ENST00000574867 HSD17B8Q92506 261 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 ADI1Q9BV57 179 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 SIAEQ9HAT2 523 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 SLC17A5Q9NRA2 495 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 COA3Q9Y2R0 106 aaPredicted RBP14.97□□□□□ -0.01
NUP88-210ENST00000574867 FASNP49327 2511 aaKnown RBP14.97□□□□□ -0.01
NUP88-210ENST00000574867 ARPC4-TTLL3A0A0A6YYG9 625 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 TUBAL3A6NHL2 446 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 CLDN1O95832 211 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 PAX7P23759 505 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 VHLP40337 213 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 BLVRAP53004 296 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 ETFDHQ16134 617 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 HIKESHIQ53FT3 197 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 DPPA2Q7Z7J5 298 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 CPOQ8IVL8 374 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 TCEANCQ8N8B7 351 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 CYGBQ8WWM9 190 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 NANOS1Q8WY41 292 aaKnown RBP14.97□□□□□ -0.01
NUP88-210ENST00000574867 NABP1Q96AH0 204 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 OTULINQ96BN8 352 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 APOL4Q9BPW4 351 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 MED18Q9BUE0 208 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 SEC61A2Q9H9S3 476 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 MOV10Q9HCE1 1003 aaKnown RBP14.97□□□□□ -0.01
NUP88-210ENST00000574867 MOKQ9UQ07 419 aa14.97□□□□□ -0.01
NUP88-210ENST00000574867 A0A096LPE4 126 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 A0A1W2PPZ6 126 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 H0YAE9 185 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 C19orf84I3L1E1 186 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 M0R129 80 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 TLX2O43763 284 aaPredicted RBP14.96□□□□□ -0.01
NUP88-210ENST00000574867 MSR1P21757 451 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 CDAP32320 146 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 AQP4P55087 323 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 UBE2NP61088 152 aaKnown RBP14.96□□□□□ -0.01
NUP88-210ENST00000574867 ACBD4Q8NC06 268 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 PTP4A1Q93096 173 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 MUCL1Q96DR8 90 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 HCAR1Q9BXC0 346 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 POLE4Q9NR33 117 aa14.96□□□□□ -0.01
NUP88-210ENST00000574867 A1L4Q6 167 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 SH3D21A4FU49 640 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 MPZL2O60487 215 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 WNT11O96014 354 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 GAAP10253 952 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 CAPGP40121 348 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 HSPA13P48723 471 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 ADARB1P78563 741 aaKnown RBP14.96□□□□□ -0.02
NUP88-210ENST00000574867 IL18R1Q13478 541 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 SLC35D3Q5M8T2 416 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 FAM27BQ5VT28 67 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 NXNL2Q5VZ03 156 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 DMRTC2Q8IXT2 367 aaPredicted RBP14.96□□□□□ -0.02
NUP88-210ENST00000574867 MED20Q9H944 212 aa14.96□□□□□ -0.02
NUP88-210ENST00000574867 HRGP04196 525 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 GYPBP06028 91 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 PYCR1P32322 319 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 HSF2Q03933 536 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 PPA1Q15181 289 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 TAB1Q15750 504 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 SNCBQ16143 134 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 KCNMB1Q16558 191 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 SGCAQ16586 387 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 IZUMO2Q6UXV1 221 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 GID4Q8IVV7 300 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 SLC26A10Q8NG04 563 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 DACH2Q96NX9 599 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 IL4I1Q96RQ9 567 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 KCNN2Q9H2S1 579 aa14.95□□□□□ -0.02
NUP88-210ENST00000574867 GLCEO94923 617 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 UBL3O95164 117 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 CLUP10909 449 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 SNRPGP62308 76 aaKnown RBP14.94□□□□□ -0.02
NUP88-210ENST00000574867 LSM6P62312 80 aaKnown RBP14.94□□□□□ -0.02
NUP88-210ENST00000574867 SLC36A2Q495M3 483 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms