RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CD40P25942 277 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 CRABP1P29762 137 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 MRPS34P82930 218 aaKnown RBP9.62□□□□□ -0.87
CHD3-216ENST00000573936 BSPH1Q075Z2 132 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 GSG1Q2KHT4 349 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 SLC36A2Q495M3 483 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 ADAM5Q6NVV9 412 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 TMEM53Q6P2H8 277 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 DNM1P34Q6PK57 102 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 ZNF704Q6ZNC4 412 aaPredicted RBP9.62□□□□□ -0.87
CHD3-216ENST00000573936 SLC16A14Q7RTX9 510 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 ZDHHC13Q8IUH4 622 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 SVOPLQ8N434 492 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 ATG16L2Q8NAA4 619 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 NSMAFQ92636 917 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 NINJ1Q92982 152 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 RASD2Q96D21 266 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 SLC38A2Q96QD8 506 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 PKP2Q99959 881 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 NIPSNAP1Q9BPW8 284 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 KCNS3Q9BQ31 491 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 WACQ9BTA9 647 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 TSSK6Q9BXA6 273 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 EGLN3Q9H6Z9 239 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 PLEKHF2Q9H8W4 249 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 NTN4Q9HB63 628 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 TBC1D23Q9NUY8 699 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 B3GNT2Q9NY97 397 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 KIF17Q9P2E2 1029 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 FREM1Q5H8C1 2179 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 ABCA2Q9BZC7 2435 aa9.62□□□□□ -0.87
CHD3-216ENST00000573936 G3V2T6 193 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 H3BN98 237 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 ABCD4O14678 606 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 RAB36O95755 333 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 PTHP01270 115 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 IGKV3-15P01624 115 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 OSMP13725 252 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 ANPEPP15144 967 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 HIST1H1CP16403 213 aaKnown RBP9.61□□□□□ -0.87
CHD3-216ENST00000573936 DNASE1P24855 282 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 CDKN2AP42771 156 aaKnown RBP9.61□□□□□ -0.87
CHD3-216ENST00000573936 RAB1AP62820 205 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 TUBA1BP68363 451 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 TUBA4AP68366 448 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 FMODQ06828 376 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 RIPK1Q13546 671 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 SGCAQ16586 387 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 CLEC12AQ5QGZ9 265 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 C20orf204Q6ZNR8 217 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 FOXL2NBQ6ZUU3 175 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 TUBA1AQ71U36 451 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 AMIGO2Q86SJ2 522 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 SKA3Q8IX90 412 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 PQLC1Q8N2U9 271 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 OR2T33Q8NG76 320 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 TEX47Q8TBZ9 253 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 CENPNQ96H22 339 aaPredicted RBP9.61□□□□□ -0.87
CHD3-216ENST00000573936 HS3ST6Q96QI5 342 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 TEX12Q9BXU0 123 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 DCLRE1BQ9H816 532 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 RNF121Q9H920 327 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 SEC61A2Q9H9S3 476 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 CCNB1IP1Q9NPC3 277 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 NKX1-2Q9UD57 310 aaPredicted RBP9.61□□□□□ -0.87
CHD3-216ENST00000573936 KLHL21Q9UJP4 597 aa9.61□□□□□ -0.87
CHD3-216ENST00000573936 NSD1Q96L73 2696 aaPredicted RBP9.61□□□□□ -0.87
CHD3-216ENST00000573936 IGKV1D-43A0A0B4J1Z2 117 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 IGHV1-18A0A0C4DH31 117 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 A0A1W2PPL8 197 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 H7C1C5 153 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 BHLHE40O14503 412 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 HS3ST1O14792 307 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 SLC16A7O60669 478 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 SOX14O95416 240 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 ATP6V1G2O95670 118 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 BAG2O95816 211 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 PLAUP00749 431 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 IFNGP01579 166 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 IGLV1-44P01699 117 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 HLA-HP01893 362 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 CRYAAP02489 173 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 CST2P09228 141 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 FOSL1P15407 271 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 ZNF23P17027 643 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 MSR1P21757 451 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 PRKACGP22612 351 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 LAP3P28838 519 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 PTDSS1P48651 473 aaKnown RBP9.6□□□□□ -0.87
CHD3-216ENST00000573936 PCBD1P61457 104 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 LCN6P62502 163 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 PLP2Q04941 152 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 PIGFQ07326 219 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHD3-216ENST00000573936 ZNF672Q499Z4 452 aaPredicted RBP9.6□□□□□ -0.87
CHD3-216ENST00000573936 FAM27BQ5VT28 67 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 LEG1Q6P5S2 330 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 SLC22A25Q6T423 547 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 PTCHD4Q6ZW05 846 aa9.6□□□□□ -0.87
CHD3-216ENST00000573936 SYT9Q86SS6 491 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms