RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ERVS71-1P61550 626 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 GLO1Q04760 184 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 TRAM2Q15035 370 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 TAF11Q15544 211 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 TRIP10Q15642 601 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 HIST3H3Q16695 136 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 NRN1LQ496H8 165 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 IFI44LQ53G44 452 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 FAM120AOSQ5T036 256 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 C10orf128Q5T292 105 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 TMEM154Q6P9G4 183 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 ZNF730Q6ZMV8 503 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 RRM2BQ7LG56 351 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 OAFQ86UD1 273 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 CYP4Z1Q86W10 505 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 MEX3DQ86XN8 651 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 NRMQ8IXM6 262 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 OFCC1Q8IZS5 231 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 PAQR4Q8N4S7 273 aaPredicted RBP8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 OR51A7Q8NH64 312 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 SYNPRQ8TBG9 265 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 LIPHQ8WWY8 451 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 C11orf40Q8WZ69 217 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 TMEM158Q8WZ71 300 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 HDAC2Q92769 488 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 HSH2DQ96JZ2 352 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 RBP7Q96R05 134 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 KCTD14Q9BQ13 255 aaPredicted RBP8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 REPIN1Q9BWE0 567 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 MRPL13Q9BYD1 178 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 BCL2L14Q9BZR8 327 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 NDEL1Q9GZM8 345 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 FAM107BQ9H098 131 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 EFCAB1Q9HAE3 211 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 TAAR3PQ9P1P4 343 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 HIF3AQ9Y2N7 669 aa8.29□□□□□ -1.08
NPLOC4-212ENST00000573328 NPIPB13A6NJU9 1138 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 EFCAB9A8MZ26 197 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 NPIPB4C9JG80 1138 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 NME4O00746 187 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 NDUFAB1O14561 156 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 PHF1O43189 567 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 CLPTM1O96005 669 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 HPXP02790 462 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 MT-ND5P03915 603 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 IGFBP1P08833 259 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 TACSTD2P09758 323 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 ZNF32P17041 273 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 MAKP20794 623 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 ACHEP22303 614 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 IL2RGP31785 369 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 RPL4P36578 427 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 GPR4P46093 362 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 GSK3BP49841 420 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 RPL27P61353 136 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 ERVK-25P63136 954 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 MRPS34P82930 218 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 RIN1Q13671 783 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 PABPC1L2AQ5JQF8 200 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 ARMC4Q5T2S8 1044 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 FAM205BPQ63HN1 556 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 CBLL1Q75N03 491 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 SLC15A3Q8IY34 581 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 LINC01356Q8N9X3 169 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 OR1J1Q8NGS3 322 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 OR13C2Q8NGS9 318 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 AKR7LQ8NHP1 331 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 SPATA3Q8NHX4 192 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 FNDC8Q8TC99 324 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 RDH5Q92781 318 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 TSPAN32Q96QS1 320 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 SEPHS2Q99611 448 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 HOPXQ9BPY8 73 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 SOX7Q9BT81 388 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 ALG12Q9BV10 488 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 SIAEQ9HAT2 523 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 SMURF2Q9HAU4 748 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 SLCO1C1Q9NYB5 712 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 EIF3KQ9UBQ5 218 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 SNX13Q9Y5W8 968 aa8.28□□□□□ -1.08
NPLOC4-212ENST00000573328 SVEP1Q4LDE5 3571 aa8.27□□□□□ -1.08
NPLOC4-212ENST00000573328 DNHD1Q96M86 4753 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 IGKV1D-43A0A0B4J1Z2 117 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 C5orf49A4QMS7 147 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 HTR3EA5X5Y0 456 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 A6NIZ1 184 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 H7C1C5 153 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 XKRYO14609 159 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 PPIHO43447 177 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 MGRN1O60291 552 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 LILRA1O75019 489 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 GMNNO75496 209 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 NCR1O76036 304 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 SNAP29O95721 258 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 IGHMP01871 453 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 MMP7P09237 267 aaPredicted RBP8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 TSPAN19P0C672 248 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 NCK1P16333 377 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 STOMP27105 288 aa8.27□□□□□ -1.09
NPLOC4-212ENST00000573328 GCH1P30793 250 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms