RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 GYPBP06028 91 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 OR8G3PP0DMU2 310 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 PPP3CBP16298 524 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 ZNF823P16415 610 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 SPI1P17947 270 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 LAP3P28838 519 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 CDAP32320 146 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 CAPGP40121 348 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 PEX19P40855 299 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 HSPA13P48723 471 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 ZNF133P52736 654 aaPredicted RBP8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 BLVRAP53004 296 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 SORDQ00796 357 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 TFF3Q07654 80 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 IL18R1Q13478 541 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 SNTB1Q13884 538 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 GABRA6Q16445 453 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 TBRG1Q3YBR2 411 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 ZNF362Q5T0B9 420 aaPredicted RBP8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 LCN1P1Q5VSP4 162 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 GID4Q8IVV7 300 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 LRRC18Q8N456 261 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 C17orf78Q8N4C9 275 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 SLC22A24Q8N4F4 322 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 SETD9Q8NE22 299 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 OR52N5Q8NH56 324 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 TRUB1Q8WWH5 349 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 ZC3HAV1LQ96H79 300 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 MUS81Q96NY9 551 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 PITX2Q99697 317 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 CDADC1Q9BWV3 514 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 NELFAQ9H3P2 528 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 HINT3Q9NQE9 182 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 RASSF1Q9NS23 344 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 UGT2A1Q9Y4X1 527 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 PCNX3Q9H6A9 2034 aa8.29□□□□□ -1.08
NPLOC4-208ENST00000572351 IGLV1-36A0A0B4J1U3 117 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 A0A1W2PR80 420 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CLEC18AA5D8T8 446 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 OR5H1A6NKK0 313 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 SLC22A31A6NKX4 558 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 DCTN6O00399 190 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 DLGAP1O14490 977 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CASKO14936 926 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 PRODHO43272 600 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 RAB36O95755 333 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CLIC3O95833 236 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 GPANK1O95872 356 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 WNT11O96014 354 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CLUP10909 449 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CD79AP11912 226 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 MSR1P21757 451 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 GRNP28799 593 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 GSTT1P30711 240 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 FMO3P31513 532 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CCKARP32238 428 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 MRPS34P82930 218 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 TEKQ02763 1124 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 DBPQ10586 325 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 APOFQ13790 326 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 SLC36A2Q495M3 483 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 NRN1LQ496H8 165 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 TIMM23BQ5SRD1 257 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 C6orf52Q5T4I8 152 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CLEC18BQ6UXF7 455 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 SLC16A14Q7RTX9 510 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 ZBTB46Q86UZ6 589 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 P2RY8Q86VZ1 359 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 WFDC8Q8IUA0 241 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CCDC36Q8IYA8 594 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 C8orf59Q8N0T1 100 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CLEC18CQ8NCF0 446 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 BBS1Q8NFJ9 593 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 LINC01560Q8TB33 94 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 C11orf40Q8WZ69 217 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 HSD17B8Q92506 261 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 HTRA1Q92743 480 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 BCL2L2Q92843 193 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 RFKQ969G6 155 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 Q96MT0 163 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 DDOQ99489 341 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 SH3GL3Q99963 347 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 HCAR1Q9BXC0 346 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 NMNAT2Q9BZQ4 307 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 OR10A4Q9H209 315 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 RNF121Q9H920 327 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 SIAEQ9HAT2 523 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 EMC7Q9NPA0 242 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CCNB1IP1Q9NPC3 277 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 POLE4Q9NR33 117 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 SLC17A5Q9NRA2 495 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 DNAJC27Q9NZQ0 273 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 MOKQ9UQ07 419 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 AMDHD2Q9Y303 409 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CHD6Q8TD26 2715 aa8.28□□□□□ -1.08
NPLOC4-208ENST00000572351 CFAP46Q8IYW2 2715 aa8.27□□□□□ -1.09
NPLOC4-208ENST00000572351 SH3D21A4FU49 640 aa8.27□□□□□ -1.09
NPLOC4-208ENST00000572351 TVP23AA6NH52 213 aa8.27□□□□□ -1.09
NPLOC4-208ENST00000572351 C12orf71A8MTZ7 269 aa8.27□□□□□ -1.09
NPLOC4-208ENST00000572351 C19orf84I3L1E1 186 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms