RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MITFO75030 526 aaPredicted RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 CIB2O75838 187 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 GOSR1O95249 250 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 CD8AP01732 235 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 SOD3P08294 240 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 DANCRP0C864 163 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 CD79AP11912 226 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 CCL2P13500 99 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 APEHP13798 732 aaKnown RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 ZNF14P17017 642 aaPredicted RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 PTAFRP25105 342 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 LAP3P28838 519 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 EPHA2P29317 976 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 NOS3P29474 1203 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 SLC6A6P31641 620 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 CAPZA2P47755 286 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 GIPRP48546 466 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 PTDSS1P48651 473 aaKnown RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 NR1H2P55055 460 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 UBE2NP61088 152 aaKnown RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 RAP1BP61224 184 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 RAP1AP62834 184 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 NAAAQ02083 359 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 HGFACQ04756 655 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 NPRL3Q12980 569 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 RAB39AQ14964 217 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 ATP6AP1Q15904 470 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 MEP1BQ16820 701 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 SLC36A3Q495N2 470 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 ZNF672Q499Z4 452 aaPredicted RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 THEM4Q5T1C6 240 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 GPR139Q6DWJ6 353 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 ACSM5Q6NUN0 579 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 FAHD1Q6P587 224 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 LEG1Q6P5S2 330 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 SHQ1Q6PI26 577 aaKnown RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 LYPD4Q6UWN0 246 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 CD300LDQ6UXZ3 194 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 KRTAP1-3Q8IUG1 177 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 OR6V1Q8N148 313 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 PIAS4Q8N2W9 510 aaPredicted RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 CYB561A3Q8NBI2 242 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 NPEPL1Q8NDH3 523 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 OR52E2Q8NGJ4 325 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 PKP2Q99959 881 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 USB1Q9BQ65 265 aaKnown RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 IFT27Q9BW83 186 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 TSSK6Q9BXA6 273 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 HCAR1Q9BXC0 346 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 NUAK2Q9H093 628 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 ESRP2Q9H6T0 727 aaKnown RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 SMURF2Q9HAU4 748 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 OBP2BQ9NPH6 170 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 KRCC1Q9NPI7 259 aaPredicted RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 GRHPRQ9UBQ7 328 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 MGAT4BQ9UQ53 548 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 COA3Q9Y2R0 106 aaPredicted RBP6.06□□□□□ -1.44
SMG6-209ENST00000571442 AP4S1Q9Y587 144 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 ARFGEF3Q5TH69 2177 aa6.06□□□□□ -1.44
SMG6-209ENST00000571442 IGHV2OR16-5A0A0B4J2B6 119 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 A0A1W2PPL8 197 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 ARRDC5A6NEK1 342 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 SAC3D1A6NKF1 404 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 M0R129 80 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 GNGT2O14610 69 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 SLC16A7O60669 478 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 ENTPD5O75356 428 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 E2F6O75461 281 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 WNT11O96014 354 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 OR8G3PP0DMU2 310 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 GAAP10253 952 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 CLUP10909 449 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 ZNF35P13682 527 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 HOXB1P14653 301 aaPredicted RBP6.05□□□□□ -1.44
SMG6-209ENST00000571442 ZNF32P17041 273 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 ANOS1P23352 680 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 HOXC12P31275 282 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 PYCR1P32322 319 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 IFNGR2P38484 337 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 RPS6KA3P51812 740 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 CDH11P55287 796 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 RAB1AP62820 205 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 MRPS34P82930 218 aaKnown RBP6.05□□□□□ -1.44
SMG6-209ENST00000571442 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMG6-209ENST00000571442 CRMP1Q14194 572 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 TESK1Q15569 626 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 SGCAQ16586 387 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 GSG1Q2KHT4 349 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 TMEM255AQ5JRV8 349 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 TMEM236Q5W0B7 351 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 FAM205BPQ63HN1 556 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 SLC22A25Q6T423 547 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 TMEM108Q6UXF1 575 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 SLC16A14Q7RTX9 510 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 YTHDF3Q7Z739 585 aaKnown RBP6.05□□□□□ -1.44
SMG6-209ENST00000571442 LNX2Q8N448 690 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 LINC00471Q8N535 108 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 SLC37A3Q8NCC5 494 aa6.05□□□□□ -1.44
SMG6-209ENST00000571442 CPEB3Q8NE35 698 aaKnown RBP6.05□□□□□ -1.44
SMG6-209ENST00000571442 OR9Q1Q8NGQ5 310 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms