RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 ZNF43P17038 809 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 CASP14P31944 242 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 TNNT2P45379 298 aaPredicted RBP1.3□□□□□ -2.2
BBS4-215ENST00000569001 NCBP2P52298 156 aaKnown RBP eCLIP1.3□□□□□ -2.2
BBS4-215ENST00000569001 FBXW4P57775 412 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 ERVK-25P63136 954 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 SYCNQ0VAF6 134 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 SRSF5Q13243 272 aaKnown RBP1.3□□□□□ -2.2
BBS4-215ENST00000569001 PPIL2Q13356 520 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 KRTAP6-3Q3LI67 103 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 XKR7Q5GH72 579 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 DMRTC1Q5HYR2 192 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 ZNF684Q5T5D7 378 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 RAET1LQ5VY80 246 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 TMEM107Q6UX40 140 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 HSDL2Q6YN16 418 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 CERS6Q6ZMG9 384 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 KDM7AQ6ZMT4 941 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 LINC00173Q6ZV60 143 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 PGAP1Q75T13 922 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 SCD5Q86SK9 330 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 PSTKQ8IV42 348 aaKnown RBP1.3□□□□□ -2.2
BBS4-215ENST00000569001 PIANPQ8IYJ0 282 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 VN1R2Q8NFZ6 395 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 OR7G2Q8NG99 324 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 KCNG3Q8TAE7 436 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 GPR151Q8TDV0 419 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 EXOSC8Q96B26 276 aaKnown RBP1.3□□□□□ -2.2
BBS4-215ENST00000569001 C12orf42Q96LP6 360 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 NUP58Q9BVL2 599 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 RIOK2Q9BVS4 552 aaKnown RBP1.3□□□□□ -2.2
BBS4-215ENST00000569001 PPA2Q9H2U2 334 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 NCOR1P1Q9H4R4 102 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 LY9Q9HBG7 655 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 IL26Q9NPH9 171 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 GLRX2Q9NS18 164 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 ZNF355PQ9NSJ1 428 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 RAB20Q9NX57 234 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 THUMPD1Q9NXG2 353 aaKnown RBP1.3□□□□□ -2.2
BBS4-215ENST00000569001 KLHL28Q9NXS3 571 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 KCNIP1Q9NZI2 227 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 PISDQ9UG56 409 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 CRCT1Q9UGL9 99 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 FBN1P35555 2871 aaKnown RBP1.3□□□□□ -2.2
BBS4-215ENST00000569001 CDHR2Q9BYE9 1310 aa1.3□□□□□ -2.2
BBS4-215ENST00000569001 PHF3Q92576 2039 aaKnown RBP1.3□□□□□ -2.2
BBS4-215ENST00000569001 DOCK9Q9BZ29 2069 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 IGKV3D-11A0A0A0MRZ8 115 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 IGHV5-51A0A0C4DH38 117 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 INS-IGF2F8WCM5 200 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 RBFOX2O43251 390 aaKnown RBP eCLIP1.29□□□□□ -2.2
BBS4-215ENST00000569001 ERLIN1O75477 346 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CBR3O75828 277 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 C2P06681 752 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CSF3P09919 207 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CT62P0C5K7 136 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 LINC00869P0C866 280 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 HPGDP15428 266 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 GALP22466 123 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 HMGB2P26583 209 aaKnown RBP1.29□□□□□ -2.2
BBS4-215ENST00000569001 IFNA8P32881 189 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 RDXP35241 583 aaKnown RBP1.29□□□□□ -2.2
BBS4-215ENST00000569001 NPBWR2P48146 333 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 TPMTP51580 245 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 RAP1AP62834 184 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 KCNJ2P63252 427 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 GBE1Q04446 702 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CUL2Q13617 745 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 ARHGAP19Q14CB8 494 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 PPP1R7Q15435 360 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 SPANXN2Q5MJ10 180 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 PRAMEF20Q5VT98 475 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CARD17Q5XLA6 110 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 LRRC66Q68CR7 880 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 LRRC74BQ6ZQY2 392 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 PEX26Q7Z412 305 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 BIVMQ86UB2 503 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CCDC65Q8IXS2 484 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 UBALD2Q8IYN6 164 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 GTPBP8Q8N3Z3 284 aaPredicted RBP1.29□□□□□ -2.2
BBS4-215ENST00000569001 ACOT4Q8N9L9 421 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 FNDC5Q8NAU1 212 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 OR1L6Q8NGR2 347 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 OR2G3Q8NGZ4 309 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CD300LFQ8TDQ1 290 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 PYROXD1Q8WU10 500 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 ACOT11Q8WXI4 607 aaPredicted RBP1.29□□□□□ -2.2
BBS4-215ENST00000569001 PIBF1Q8WXW3 757 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 ELMO1Q92556 727 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 STMN2Q93045 179 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 SLC38A4Q969I6 547 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 PLEKHA8Q96JA3 519 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 TCEANC2Q96MN5 208 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 FMO2Q99518 471 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CHP1Q99653 195 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 KCTD14Q9BQ13 255 aaPredicted RBP1.29□□□□□ -2.2
BBS4-215ENST00000569001 EXO5Q9H790 373 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 NEK6Q9HC98 313 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CTPS2Q9NRF8 586 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 GIN1Q9NXP7 522 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms