RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 NR2C1P13056 603 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 CCL2P13500 99 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 TCN1P20061 433 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-216ENST00000567023 COL8A2P25067 703 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 PRDX6P30041 224 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 IFNA8P32881 189 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 CDH15P55291 814 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 SELENOVP59797 346 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 MYBPC1Q00872 1141 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 PLP2Q04941 152 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 MAD2L1BPQ15013 274 aaPredicted RBP12.2□□□□□ -0.46
COMMD4-216ENST00000567023 CR1LQ2VPA4 569 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 ALG10Q5BKT4 473 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 HACD2Q6Y1H2 254 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 ARPINQ7Z6K5 226 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 SLC15A3Q8IY34 581 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 RBM15BQ8NDT2 890 aaKnown RBP12.2□□□□□ -0.46
COMMD4-216ENST00000567023 FNDC8Q8TC99 324 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 LZICQ8WZA0 190 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 NABP1Q96AH0 204 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 BPIFA2Q96DR5 249 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 CMTM5Q96DZ9 223 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 TPD52L3Q96J77 140 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 LRMDAQ9H2I8 198 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 CDH20Q9HBT6 801 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 CMTM6Q9NX76 183 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 NKIRAS2Q9NYR9 191 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 GPR160Q9UJ42 338 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 ARL2BPQ9Y2Y0 163 aa12.2□□□□□ -0.46
COMMD4-216ENST00000567023 SLC2A10O95528 541 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 FAM157BP0CG42 384 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 NAT2P11245 290 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 KLF3P57682 345 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-216ENST00000567023 ANKDD1AQ495B1 522 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 THEM4Q5T1C6 240 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 FAM27BQ5VT28 67 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 SLC25A47Q6Q0C1 308 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 IL17RELQ6ZVW7 336 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 RNF113BQ8IZP6 322 aaKnown RBP12.19□□□□□ -0.46
COMMD4-216ENST00000567023 LRRC18Q8N456 261 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 LRRC75AQ8NAA5 344 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 CPEB3Q8NE35 698 aaKnown RBP12.19□□□□□ -0.46
COMMD4-216ENST00000567023 SYNPRQ8TBG9 265 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 C11orf40Q8WZ69 217 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 CCT8L2Q96SF2 557 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 HOPXQ9BPY8 73 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-216ENST00000567023 ALG12Q9BV10 488 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 KCNN2Q9H2S1 579 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 EFCAB1Q9HAE3 211 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 MAN2C1Q9NTJ4 1040 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 SLCO1C1Q9NYB5 712 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 TAAR3PQ9P1P4 343 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 TMEFF2Q9UIK5 374 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-216ENST00000567023 ANK2Q01484 3957 aa12.19□□□□□ -0.46
COMMD4-216ENST00000567023 IGKV1D-43A0A0B4J1Z2 117 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 A0A1W2PPW3 197 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 C17orf100A8MU93 164 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 B4DSR2 109 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 FFAR1O14842 300 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 RP2O75695 350 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 CLPTM1O96005 669 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 IGHV3-13P01766 116 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 IFI30P13284 250 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 FUT4P22083 530 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 CDAP32320 146 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 APLNRP35414 380 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 GPR6P46095 362 aaPredicted RBP12.18□□□□□ -0.46
COMMD4-216ENST00000567023 DVL1P1P54792 670 aaPredicted RBP12.18□□□□□ -0.46
COMMD4-216ENST00000567023 RPL27P61353 136 aaKnown RBP12.18□□□□□ -0.46
COMMD4-216ENST00000567023 PRKCDQ05655 676 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 FHL1Q13642 323 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 MOGQ16653 247 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 NKPD1Q17RQ9 610 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 PCGF3Q3KNV8 242 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 PABPC1L2AQ5JQF8 200 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 VTCN1Q7Z7D3 282 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 C1orf174Q8IYL3 243 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 OFCC1Q8IZS5 231 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 FAM156AQ8NDB6 213 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 YIPF5Q969M3 257 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 POM121L2Q96KW2 1035 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 RBP7Q96R05 134 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 HINT3Q9NQE9 182 aaKnown RBP12.18□□□□□ -0.46
COMMD4-216ENST00000567023 SNX13Q9Y5W8 968 aa12.18□□□□□ -0.46
COMMD4-216ENST00000567023 PIP5K1CO60331 668 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 ICMTO60725 284 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 DCTN3O75935 186 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 NCR1O76036 304 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 PRSS23O95084 383 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 FAM107AO95990 144 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 IFNW1P05000 195 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 LCKP06239 509 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 ZNF32P17041 273 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 MAKP20794 623 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 STOMP27105 288 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 SLC9A3P48764 834 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 CTXN1P60606 82 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 ERVS71-1P61550 626 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 HSF2Q03933 536 aa12.17□□□□□ -0.46
COMMD4-216ENST00000567023 LIPEQ05469 1076 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms