RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 FAM220BPB1ANY3 271 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 CENPBD1B2RD01 187 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 CXCR6O00574 342 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 SPRY3O43610 288 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 PIP5K1CO60331 668 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 CCDC22O60826 627 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 IFNW1P05000 195 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 NR2C1P13056 603 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 COX4I1P13073 169 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 ZNF250P15622 560 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 ZNF32P17041 273 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 MAKP20794 623 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 PCMT1P22061 227 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 ACHEP22303 614 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 LAP3P28838 519 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 RPL4P36578 427 aaKnown RBP5.49□□□□□ -1.53
TCF4-228ENST00000565393 ZNF81P51508 661 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 DVL1P1P54792 670 aaPredicted RBP5.49□□□□□ -1.53
TCF4-228ENST00000565393 CDH15P55291 814 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 RPL27P61353 136 aaKnown RBP5.49□□□□□ -1.53
TCF4-228ENST00000565393 PCBD1P61457 104 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 ERVK-25P63136 954 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 MRPS34P82930 218 aaKnown RBP5.49□□□□□ -1.53
TCF4-228ENST00000565393 PSG4Q00888 419 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 TEKQ02763 1124 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 GLO1Q04760 184 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 LIPEQ05469 1076 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 FMODQ06828 376 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 TRAM2Q15035 370 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 HFEQ30201 348 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 PCGF3Q3KNV8 242 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 KRTAP24-1Q3LI83 254 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 ZNF718Q3SXZ3 478 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 NRN1LQ496H8 165 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 SPATA46Q5T0L3 261 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 ARMC4Q5T2S8 1044 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 FAM27BQ5VT28 67 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 SLC25A47Q6Q0C1 308 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 TBPL2Q6SJ96 375 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 ARL9Q6T311 187 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 ZNF730Q6ZMV8 503 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 RINLQ6ZS11 566 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 GLCCI1Q86VQ1 547 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 CPEB3Q8NE35 698 aaKnown RBP5.49□□□□□ -1.53
TCF4-228ENST00000565393 AKR7LQ8NHP1 331 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 CLDND2Q8NHS1 167 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 LIPHQ8WWY8 451 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 CCL17Q92583 94 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 HDAC2Q92769 488 aaKnown RBP5.49□□□□□ -1.53
TCF4-228ENST00000565393 YIPF5Q969M3 257 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 RCN3Q96D15 328 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 TSPAN32Q96QS1 320 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 HOPXQ9BPY8 73 aaPredicted RBP5.49□□□□□ -1.53
TCF4-228ENST00000565393 C19orf24Q9BVV8 132 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 RERGLQ9H628 205 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 METTL17Q9H7H0 456 aaPredicted RBP5.49□□□□□ -1.53
TCF4-228ENST00000565393 SMURF2Q9HAU4 748 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 HIF1ANQ9NWT6 349 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 GRHPRQ9UBQ7 328 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 GRIP1Q9Y3R0 1128 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 FAM32AQ9Y421 112 aaKnown RBP5.49□□□□□ -1.53
TCF4-228ENST00000565393 SNX13Q9Y5W8 968 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 CAPN7Q9Y6W3 813 aa5.49□□□□□ -1.53
TCF4-228ENST00000565393 NUP214P35658 2090 aaPredicted RBP5.48□□□□□ -1.53
TCF4-228ENST00000565393 TRAV27A0A087WT01 109 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 IGKV1D-43A0A0B4J1Z2 117 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 IGHV1-69-2A0A0G2JMI3 117 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 PLSCR5A0PG75 271 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 GMNCA6NCL1 334 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 A6NIZ1 184 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 C12orf71A8MTZ7 269 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 FAM157AC9JC47 383 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 J3KTA2 159 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 FXYD1O00168 92 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 XKRYO14609 159 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 WNT9BO14905 357 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 TCF21O43680 179 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 GMNNO75496 209 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 SNAP29O95721 258 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 SERPINA1P01009 418 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 IGF2P01344 180 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 MMP7P09237 267 aaPredicted RBP5.48□□□□□ -1.53
TCF4-228ENST00000565393 GAAP10253 952 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 CRYBB2P43320 205 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 CENPAP49450 140 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 ARHGDIAP52565 204 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 RAP1BP61224 184 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 RAP1AP62834 184 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 MRPS11P82912 194 aaKnown RBP5.48□□□□□ -1.53
TCF4-228ENST00000565393 PRKCDQ05655 676 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 TAF11Q15544 211 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 ZBED5Q49AG3 693 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 IFI44LQ53G44 452 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 C10orf128Q5T292 105 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 AVPI1Q5T686 147 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 CGB2Q6NT52 195 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 ACSM5Q6NUN0 579 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 SHQ1Q6PI26 577 aaKnown RBP5.48□□□□□ -1.53
TCF4-228ENST00000565393 THSD4Q6ZMP0 1018 aa5.48□□□□□ -1.53
TCF4-228ENST00000565393 USP51Q70EK9 711 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms