RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 H0YGG7 62 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MYOGP15173 224 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ST6GAL1P15907 406 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RAB13P51153 203 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ARF3P61204 181 aaPredicted RBP18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 HFEQ30201 348 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 EIF4E3Q8N5X7 224 aaKnown RBP18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RCBTB1Q8NDN9 531 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 OR51A2Q8NGJ7 313 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ROBO4Q8WZ75 1007 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ZBTB8AQ96BR9 441 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 HHIPL1Q96JK4 782 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CMTM3Q96MX0 182 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SLC6A7Q99884 636 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SELENOIQ9C0D9 397 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MBD2Q9UBB5 411 aa18.57■□□□□ 0.56
MAP1LC3B-206ENST00000564844 A0A1B0GW55 424 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 A0A1W2PQU0 124 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RNF222A6NCQ9 220 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 DUX4L2P0CJ85 424 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 DUX4L3P0CJ86 424 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 DUX4L4P0CJ87 422 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 DUX4L5P0CJ88 424 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 DUX4L6P0CJ89 424 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 DUX4L7P0CJ90 424 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ACTR1BP42025 376 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ACTR1AP61163 376 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PPP1CAP62136 330 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ETV3LQ6ZN32 361 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 DPY19L2P2Q6ZN68 376 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RTN4RL2Q86UN3 420 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SERINC2Q96SA4 455 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 DUX4Q9UBX2 424 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GPN3Q9UHW5 284 aaPredicted RBP18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MSRAQ9UJ68 235 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TMED7Q9Y3B3 224 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GPR75O95800 540 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CDNFQ49AH0 187 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 WDR38Q5JTN6 314 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 C11orf87Q6NUJ2 197 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GPR148Q8TDV2 347 aa18.56■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CRYBA1P05813 215 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CXADRP78310 365 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SCRN3Q0VDG4 424 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MEP1BQ16820 701 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PAN3Q58A45 887 aaKnown RBP18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 DMRTC1Q5HYR2 192 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ENPP7Q6UWV6 458 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ETFBKMTQ8IXQ9 262 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GTPBP8Q8N3Z3 284 aaPredicted RBP18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CHST4Q8NCG5 386 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 WFIKKN2Q8TEU8 576 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 FAM3CQ92520 227 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 HRH4Q9H3N8 390 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PGAM2P15259 253 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GRK6P43250 576 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RPS15AP62244 130 aaKnown RBP18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ENPP2Q13822 863 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GGTLC2Q14390 218 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RAB11BQ15907 218 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ALG10Q5BKT4 473 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 FIGLAQ6QHK4 219 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CBLN3Q6UW01 205 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PM20D2Q8IYS1 436 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 OR9A4Q8NGU2 314 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SEH1LQ96EE3 360 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MRPL48Q96GC5 212 aaKnown RBP18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ELOVL3Q9HB03 270 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MED12Q93074 2177 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MAP3K8P41279 467 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CST6Q15828 149 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ITPRIPL2Q3MIP1 535 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ZNF524Q96C55 264 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SFXN1Q9H9B4 322 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ETV7Q9Y603 341 aa18.55■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MPTX1A8MV57 137 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 OIP5O43482 229 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CYB5AP00167 134 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MAPK3P27361 379 aaPredicted RBP18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 KIR3DL2P43630 455 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CAPZA2P47755 286 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PRKXP51817 358 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 NOGQ13253 232 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PPP1R1AQ13522 171 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MARCH3Q86UD3 253 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 FOXRED2Q8IWF2 684 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 KXD1Q9BQD3 176 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ZNF426Q9BUY5 554 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RAB11FIP5Q9BXF6 653 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CST11Q9H112 138 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TAS2R8Q9NYW2 309 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TNFSF18Q9UNG2 199 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ARPC4-TTLL3A0A0A6YYG9 625 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ZNF736B4DX44 427 aaPredicted RBP18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PNPP00491 289 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MECP2P51608 486 aaKnown RBP18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MGAT2Q10469 447 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SWI5Q1ZZU3 235 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ZNF684Q5T5D7 378 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RBMS3Q6XE24 437 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms