RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SERPINA1P01009 418 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 HPXP02790 462 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 SRD5A1P18405 259 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 HNF1AP20823 631 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 GSK3BP49841 420 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 SELENOVP59797 346 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 CTXN1P60606 82 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 IFI44LQ53G44 452 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 PABPC1L2AQ5JQF8 200 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 FAM120AOSQ5T036 256 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 C10orf128Q5T292 105 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 ZNF730Q6ZMV8 503 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 TREML1Q86YW5 311 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 OFCC1Q8IZS5 231 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 CLDN22Q8N7P3 220 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 OR1J2Q8NGS2 313 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 OR13C2Q8NGS9 318 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 HSH2DQ96JZ2 352 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 TSPAN32Q96QS1 320 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 SEPHS2Q99611 448 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 TAAR3PQ9P1P4 343 aa15.17■□□□□ 0.02
NME3-205ENST00000563854 ZNF346Q9UL40 294 aaKnown RBP15.17■□□□□ 0.02
NME3-205ENST00000563854 A0A1W2PPL8 197 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 PHF1O43189 567 aaPredicted RBP15.16■□□□□ 0.02
NME3-205ENST00000563854 LILRA1O75019 489 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 TACSTD2P09758 323 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 TSPAN19P0C672 248 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 NR2C1P13056 603 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 NCK1P16333 377 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 ZNF32P17041 273 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 GPR4P46093 362 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 KLF3P57682 345 aaPredicted RBP15.16■□□□□ 0.02
NME3-205ENST00000563854 RPL27P61353 136 aaKnown RBP15.16■□□□□ 0.02
NME3-205ENST00000563854 ERVK-25P63136 954 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 MRPS34P82930 218 aaKnown RBP15.16■□□□□ 0.02
NME3-205ENST00000563854 GLO1Q04760 184 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 RIN1Q13671 783 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 NRN1LQ496H8 165 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 ELFN2Q5R3F8 820 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 OAFQ86UD1 273 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 AKR7LQ8NHP1 331 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 SYNPRQ8TBG9 265 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 SNX33Q8WV41 574 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 HOPXQ9BPY8 73 aaPredicted RBP15.16■□□□□ 0.02
NME3-205ENST00000563854 KCTD14Q9BQ13 255 aaPredicted RBP15.16■□□□□ 0.02
NME3-205ENST00000563854 FAM107BQ9H098 131 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 EFCAB1Q9HAE3 211 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 SIAEQ9HAT2 523 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 MAN2C1Q9NTJ4 1040 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 UGT2A1Q9Y4X1 527 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 ATRQ13535 2644 aa15.16■□□□□ 0.02
NME3-205ENST00000563854 NPIPB13A6NJU9 1138 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 NPIPB4C9JG80 1138 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 H7C1C5 153 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 FFAR1O14842 300 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 NCR1O76036 304 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 SNAP29O95721 258 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 MMP7P09237 267 aaPredicted RBP15.15■□□□□ 0.02
NME3-205ENST00000563854 COL8A2P25067 703 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 RPL4P36578 427 aaKnown RBP15.15■□□□□ 0.02
NME3-205ENST00000563854 RAD52P43351 418 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 MAGEB1P43366 347 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 GPR6P46095 362 aaPredicted RBP15.15■□□□□ 0.02
NME3-205ENST00000563854 LCN6P62502 163 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 TMEM154Q6P9G4 183 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 CBLL1Q75N03 491 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 OR1J1Q8NGS3 322 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 C11orf40Q8WZ69 217 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 RDH5Q92781 318 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 NABP1Q96AH0 204 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 RBP7Q96R05 134 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 ELAC2Q9BQ52 826 aaKnown RBP15.15■□□□□ 0.02
NME3-205ENST00000563854 ALG12Q9BV10 488 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 SMURF2Q9HAU4 748 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 GPR160Q9UJ42 338 aa15.15■□□□□ 0.02
NME3-205ENST00000563854 CUBNO60494 3623 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 MALRD1Q5VYJ5 2156 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 GMNCA6NCL1 334 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 TPD52L2O43399 206 aaKnown RBP15.14■□□□□ 0.01
NME3-205ENST00000563854 DRD4P21917 467 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 STOMP27105 288 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 GUCA1AP43080 201 aaPredicted RBP15.14■□□□□ 0.01
NME3-205ENST00000563854 ZNF133P52736 654 aaPredicted RBP15.14■□□□□ 0.01
NME3-205ENST00000563854 UCP2P55851 309 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 PRKCDQ05655 676 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 TAF11Q15544 211 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 CR1LQ2VPA4 569 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 SPATA46Q5T0L3 261 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 SLC25A47Q6Q0C1 308 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 TBPL2Q6SJ96 375 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 RRM2BQ7LG56 351 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 CYP4Z1Q86W10 505 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 PHC2Q8IXK0 858 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 CPEB3Q8NE35 698 aaKnown RBP15.14■□□□□ 0.01
NME3-205ENST00000563854 SPATA3Q8NHX4 192 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 ZNF519Q8TB69 540 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 ACOT11Q8WXI4 607 aaPredicted RBP15.14■□□□□ 0.01
NME3-205ENST00000563854 YIPF5Q969M3 257 aa15.14■□□□□ 0.01
NME3-205ENST00000563854 NMD3Q96D46 503 aaKnown RBP15.14■□□□□ 0.01
NME3-205ENST00000563854 REPIN1Q9BWE0 567 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms