RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 C9orf106Q8NAJ2 232 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 SLC26A10Q8NG04 563 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 OR2T27Q8NH04 317 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 FAM57AQ8TBR7 257 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 INTS14Q96SY0 518 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 VCX3AQ9NNX9 186 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 ERGIC3Q9Y282 383 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 UGT2A1Q9Y4X1 527 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 MAP1BP46821 2468 aaKnown RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 A0A1W2PPL8 197 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 TMEM129A0AVI4 362 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 ERVH48-1M5A8F1 160 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 MYL12BO14950 172 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 SS18L1O75177 396 aaPredicted RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 SFTPCP11686 197 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 NR2C1P13056 603 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 AGTR1P30556 359 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 CDAP32320 146 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 ACTC1P68032 377 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 ACTA1P68133 377 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 HSF2Q03933 536 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 SYT6Q5T7P8 510 aaPredicted RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 TSPO2Q5TGU0 170 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 NSUN5P2Q63ZY6 315 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 SEM1Q6ZVN7 128 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 GLB1L2Q8IW92 636 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 ZNF485Q8NCK3 441 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 OR6N2Q8NGY6 317 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 RORBQ92753 470 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 WNT2BQ93097 391 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 ZNF837Q96EG3 531 aaPredicted RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 GMPPAQ96IJ6 420 aaPredicted RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 ALG8Q9BVK2 526 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 MND1Q9BWT6 205 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 TTTY10Q9BZA0 68 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 ULBP2Q9BZM5 246 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 GP6Q9HCN6 339 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 INPP5EQ9NRR6 644 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 PARPBPQ9NWS1 579 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 CHCHD3Q9NX63 227 aaKnown RBP8.98□□□□□ -0.97
SMG1-208ENST00000563448 KLHDC2Q9Y2U9 406 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 BOD1L1Q8NFC6 3051 aa8.98□□□□□ -0.97
SMG1-208ENST00000563448 A6NHS1 94 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 CD8B2A6NJW9 211 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 ZNF593O00488 134 aaPredicted RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 DHHO43323 396 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 WDR1O75083 606 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 GABRA1P14867 456 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 ENTPD1P49961 510 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 ADAM8P78325 824 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 GALEQ14376 348 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 GUSBP1Q15486 140 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 MED22Q15528 200 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 GFRALQ6UXV0 394 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 FOXL2NBQ6ZUU3 175 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 DPY19L4Q7Z388 723 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 GPR137CQ8N3F9 429 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 KLHL36Q8N4N3 616 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 SPRYD4Q8WW59 207 aaPredicted RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 C11orf40Q8WZ69 217 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 FCGR1BQ92637 280 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 HTRA1Q92743 480 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 RBM24Q9BX46 236 aaKnown RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 LINC00470Q9BZP3 86 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 YIPF3Q9GZM5 350 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 SLCO5A1Q9H2Y9 848 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 ISG20L2Q9H9L3 353 aaKnown RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 GPR35Q9HC97 309 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 GLRX2Q9NS18 164 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 FAM215AQ9Y5M1 114 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 DSPP15924 2871 aaKnown RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 MBD3L4A6NDZ8 208 aaPredicted RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 MBD3L3A6NE82 208 aaPredicted RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 MBD3L5A6NJ08 208 aaPredicted RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 PRR32B1ATL7 298 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 MAGEB4O15481 346 aaPredicted RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 SEC14L2O76054 403 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 IGHV3-9P01782 118 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 HRGP04196 525 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 ZNF823P16415 610 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 ABOP16442 354 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 WNT4P56705 351 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 SF3B4Q15427 424 aaKnown RBP eCLIP8.97□□□□□ -0.978e-7■■□□□ 12.3
SMG1-208ENST00000563448 SPHARQ15513 63 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 KCNMB1Q16558 191 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 PCK2Q16822 640 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 C1orf185Q5T7R7 199 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 ZNF367Q7RTV3 350 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 OR13F1Q8NGS4 319 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 OTOSQ8NHW6 89 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 MBD3L2Q8NHZ7 208 aaPredicted RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 GATAD2BQ8WXI9 593 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 APH1AQ96BI3 265 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 CNTNAP3BQ96NU0 1288 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 ALKBH3Q96Q83 286 aaPredicted RBP8.97□□□□□ -0.97
SMG1-208ENST00000563448 CNTNAP3Q9BZ76 1288 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 C12orf49Q9H741 205 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 SEC61A2Q9H9S3 476 aa8.97□□□□□ -0.97
SMG1-208ENST00000563448 CRLF2Q9HC73 371 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms