RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 VAPBO95292 243 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 CD160O95971 181 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 NGFP01138 241 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 RPN2P04844 631 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 GYPCP04921 128 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 CALB1P05937 261 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 IGHV4-34P06331 123 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 APRTP07741 180 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 GSTA2P09210 222 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 GP9P14770 177 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 CHRNB4P30926 498 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 SDC4P31431 198 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 HNRNPH3P31942 346 aaKnown RBP3.52□□□□□ -1.85
LRRC28-222ENST00000561431 DRD3P35462 400 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 PCK1P35558 622 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 NPBWR2P48146 333 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 CCR8P51685 355 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 UCNP55089 124 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 MAZP56270 477 aaKnown RBP3.52□□□□□ -1.85
LRRC28-222ENST00000561431 CXCR4P61073 352 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 ATP6V0D1P61421 351 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 RAD51Q06609 339 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 MED21Q13503 144 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 MESDQ14696 234 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 GANABQ14697 944 aaKnown RBP3.52□□□□□ -1.85
LRRC28-222ENST00000561431 CST6Q15828 149 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 IMPG1Q17R60 797 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 KIAA1644Q3SXP7 199 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 CCDC58Q4VC31 144 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 LACTB2Q53H82 288 aaPredicted RBP3.52□□□□□ -1.85
LRRC28-222ENST00000561431 SLC35D3Q5M8T2 416 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 SEL1L2Q5TEA6 688 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 GPR107Q5VW38 600 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF776Q68DI1 518 aaPredicted RBP3.52□□□□□ -1.85
LRRC28-222ENST00000561431 OR2A2Q6IF42 318 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 OR4A47Q6IF82 309 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 C3orf33Q6P1S2 294 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 STRADAQ7RTN6 431 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 SMIM29Q86T20 159 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 HIPK1Q86Z02 1210 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 CROCCP3Q8IVE0 287 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF100Q8IYN0 542 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 STK40Q8N2I9 435 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 FAM89BQ8N5H3 189 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 DEFB119Q8N690 84 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 DCAF4L2Q8NA75 395 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 CCDC197Q8NCU1 140 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 OR1L4Q8NGR5 311 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 NUBPLQ8TB37 319 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 FAM172AQ8WUF8 416 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 DYDC1Q8WWB3 177 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 DNASE2BQ8WZ79 361 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 TSACCQ96A04 125 aaPredicted RBP3.52□□□□□ -1.85
LRRC28-222ENST00000561431 FBXO17Q96EF6 278 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 PPP1R36Q96LQ0 422 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 RNF145Q96MT1 663 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 VSTM2LQ96N03 204 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 ZNF578Q96N58 590 aaPredicted RBP3.52□□□□□ -1.85
LRRC28-222ENST00000561431 MCEEQ96PE7 176 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 MCCC1Q96RQ3 725 aaPredicted RBP3.52□□□□□ -1.85
LRRC28-222ENST00000561431 NAPGQ99747 312 aaPredicted RBP3.52□□□□□ -1.85
LRRC28-222ENST00000561431 FEM1AQ9BSK4 669 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 GPR174Q9BXC1 333 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 PARD6BQ9BYG5 372 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 SRRQ9GZT4 340 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 SLC22A4Q9H015 551 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 SLITRK2Q9H156 845 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 DCLRE1BQ9H816 532 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 RNF121Q9H920 327 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 USE1Q9NZ43 259 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 BCAP29Q9UHQ4 241 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 SLC12A6Q9UHW9 1150 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 MRM2Q9UI43 246 aaKnown RBP3.52□□□□□ -1.85
LRRC28-222ENST00000561431 IKZF3Q9UKT9 509 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 ATG4BQ9Y4P1 393 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 DOCK7Q96N67 2140 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 PLXNA2O75051 1894 aa3.52□□□□□ -1.85
LRRC28-222ENST00000561431 ATG2BQ96BY7 2078 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 NCOR2Q9Y618 2525 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 KMT2BQ9UMN6 2715 aaPredicted RBP3.51□□□□□ -1.85
LRRC28-222ENST00000561431 CEP295Q9C0D2 2601 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 AKAP13Q12802 2813 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 KCNE1BA0A087WTH5 132 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 TRAV24A0A0B4J272 114 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 A0A1B0GTI1 187 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 A0A1W2PPE3 182 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 SH3PXD2BA1X283 911 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 EFCAB10A6NFE3 127 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 TMEM114B3SHH9 223 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 NPIPA7E9PJI5 369 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 SLC22A2O15244 555 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 NDUFA7O95182 113 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 SEMA4FO95754 770 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 SERPINA5P05154 406 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 CTSLP07711 333 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 RHOCP08134 193 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 GNAO1P09471 354 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 NUDT17P0C025 328 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 NPIPA8P0DM63 369 aa3.51□□□□□ -1.85
LRRC28-222ENST00000561431 ETS2P15036 469 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms