RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	OR51B5	Q9H339	312 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	TDRD3	Q9H7E2	651 aa	Known RBP	3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	SGK2	Q9HBY8	427 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	SLC40A1	Q9NP59	571 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	NANS	Q9NR45	359 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	SAMSN1	Q9NSI8	373 aa	Known RBP	3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	FAIM	Q9NVQ4	179 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	GIN1	Q9NXP7	522 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	IL37	Q9NZH6	218 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	B4GALT7	Q9UBV7	327 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	WARS2	Q9UGM6	360 aa	Known RBP	3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	NPIPA1	Q9UND3	350 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	RPL26L1	Q9UNX3	145 aa	Known RBP	3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	SCML2	Q9UQR0	700 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	MEMO1	Q9Y316	297 aa		3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	SETX	Q7Z333	2677 aa	Known RBP	3.91	□□□□□ -1.78
TCF12-223	ENST00000561235	ABCC12	Q96J65	1359 aa		3.9	□□□□□ -1.78
TCF12-223	ENST00000561235	DUOX1	Q9NRD9	1551 aa		3.9	□□□□□ -1.78
TCF12-223	ENST00000561235	SMIM31	A0A1B0GVY4	71 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235		A0A1W2PNV4	684 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	LRP5L	A4QPB2	252 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	ZFP92	A6NM28	416 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	GOLGA8J	A6NMD2	632 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF879	B4DU55	563 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	FCMR	O60667	390 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	SUPT3H	O75486	399 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	KLHL2	O95198	593 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	CRYZL1	O95825	349 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	GNA14	O95837	355 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	HSPB1	P04792	205 aa	Known RBP	3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	PCMT1	P22061	227 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	LAP3	P28838	519 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	KIR2DS2	P43631	304 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	RAB4B	P61018	213 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	NDP	Q00604	133 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	OC90	Q02509	493 aa	Predicted RBP	3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	FGL1	Q08830	312 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	SMARCB1	Q12824	385 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	CDC20	Q12834	499 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	COTL1	Q14019	142 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	LRRC36	Q1X8D7	754 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	SLC25A52	Q3SY17	297 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF544	Q6NX49	715 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	ECHDC2	Q86YB7	292 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	ERO1B	Q86YB8	467 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	CD302	Q8IX05	232 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	SKA3	Q8IX90	412 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	IFT20	Q8IY31	132 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	CLEC4F	Q8N1N0	589 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	DHRSX	Q8N5I4	330 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	ATP6V0D2	Q8N8Y2	350 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF565	Q8N9K5	539 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	SPATA4	Q8NEY3	305 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	BBS1	Q8NFJ9	593 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	OR4D5	Q8NGN0	318 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF564	Q8TBZ8	553 aa	Predicted RBP	3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	TSEN15	Q8WW01	171 aa	Known RBP	3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	CHMP6	Q96FZ7	201 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	COQ2	Q96H96	371 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	CEP170P1	Q96L14	293 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	TSNARE1	Q96NA8	513 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	OPALIN	Q96PE5	141 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	TGM7	Q96PF1	710 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF184	Q99676	751 aa	Predicted RBP	3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	C11orf70	Q9BRQ4	267 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	NEK6	Q9HC98	313 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	LZTFL1	Q9NQ48	299 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	PAQR5	Q9NXK6	330 aa	Predicted RBP	3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	ONECUT1	Q9UBC0	465 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	SEC14L3	Q9UDX4	400 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	UBQLN1	Q9UMX0	589 aa	Known RBP	3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	PLLP	Q9Y342	182 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	AK6	Q9Y3D8	172 aa	Known RBP	3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	LRRC42	Q9Y546	428 aa		3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	DDX60L	Q5H9U9	1706 aa	Known RBP	3.9	□□□□□ -1.79
TCF12-223	ENST00000561235	RTL9	Q8NET4	1388 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	UBR2	Q8IWV8	1755 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	SCN9A	Q15858	1988 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	TRANK1	O15050	2925 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	TRAV26-1	A0A087WT03	109 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235		A0A1B0GWB2	263 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	HEATR9	A2RTY3	570 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	EPOP	A6NHQ4	379 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	HSBP1L1	C9JCN9	74 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	ARPC3	O15145	178 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	HDAC3	O15379	428 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	PRKY	O43930	277 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	TBL1X	O60907	577 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	SERPINB7	O75635	380 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	UGT2B17	O75795	530 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	SCGN	O76038	276 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	LY6G6D	O95868	133 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	POU2F1	P14859	743 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	PSMB1	P20618	241 aa	Known RBP	3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	CPN2	P22792	545 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	MMP11	P24347	488 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	CDKN1B	P46527	198 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	PRKX	P51817	358 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	CDH4	P55283	916 aa		3.89	□□□□□ -1.79
TCF12-223	ENST00000561235	KRTAP10-5	P60370	271 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms