RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 MST1LQ2TV78 715 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 ZNF620Q6ZNG0 422 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 PTCHD4Q6ZW05 846 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 TGIF2LYQ8IUE0 185 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 LINC00471Q8N535 108 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 PAPD5Q8NDF8 572 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 WFDC11Q8NEX6 87 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 IL17RDQ8NFM7 739 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 NANOS1Q8WY41 292 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 NSMAFQ92636 917 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 SLCO4A1Q96BD0 722 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 ZNF570Q96NI8 536 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 POU2F3Q9UKI9 436 aa13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 SAMHD1Q9Y3Z3 626 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 FLNAP21333 2647 aaKnown RBP13.23□□□□□ -0.29
SNRPA1-213ENST00000560856 MTORP42345 2549 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 ARPC3O15145 178 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 CCNB2O95067 398 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 FARS2O95363 451 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 STAMBPO95630 424 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 SERPINA5P05154 406 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 NR2C1P13056 603 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 APOBEC3AP31941 199 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 CDKN2AP42771 156 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 PTDSS1P48651 473 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 FABP6P51161 128 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 KRR1Q13601 381 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 MICAQ29983 383 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 FAM27BQ5VT28 67 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 AGAP6Q5VW22 663 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 SHEQ5VZ18 495 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 PRSS57Q6UWY2 283 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 DPPA2Q7Z7J5 298 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 TMEM179BQ7Z7N9 219 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 MUC15Q8N387 334 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 OR4F15Q8NGB8 312 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 FANK1Q8TC84 345 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 GTPBP3Q969Y2 492 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 PERPQ96FX8 193 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 SAMD8Q96LT4 415 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 TMUB1Q9BVT8 246 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 NDEL1Q9GZM8 345 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 LRMDAQ9H2I8 198 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 CXorf56Q9H5V9 222 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 REEP1Q9H902 201 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 CBLN4Q9NTU7 201 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 FAIMQ9NVQ4 179 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 VSX1Q9NZR4 365 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 U3KQV3 271 aa13.22□□□□□ -0.29
SNRPA1-213ENST00000560856 SOCS2O14508 198 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 ENTPD5O75356 428 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 PPP1R3DO95685 299 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 TP53P04637 393 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 CTLA4P16410 223 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 NPR2P20594 1047 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 SLC6A6P31641 620 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 CDKN1AP38936 164 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 RASSF2P50749 326 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 ADIPOQQ15848 244 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 SGCAQ16586 387 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 SWI5Q1ZZU3 235 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 SLC16A14Q7RTX9 510 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 SPATA24Q86W54 205 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 FBXL14Q8N1E6 418 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 LRRC18Q8N456 261 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 NUP37Q8NFH4 326 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 OR8D4Q8NGM9 314 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 FBXO17Q96EF6 278 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 ERMAPQ96PL5 475 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 KCNS3Q9BQ31 491 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 CA10Q9NS85 328 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 IL20Q9NYY1 176 aa13.21□□□□□ -0.29
SNRPA1-213ENST00000560856 XKRYO14609 159 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 NDUFS7O75251 213 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 RAB36O95755 333 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 CST1P01037 141 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 IGFBP1P08833 259 aaPredicted RBP13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 HOXB6P17509 224 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 NR4A1P22736 598 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 LAP3P28838 519 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 ERFP50548 548 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 RPS6KA3P51812 740 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 ENDOGQ14249 297 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 GK3PQ14409 553 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 MSMPQ1L6U9 139 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 SLC36A2Q495M3 483 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 Q5PR19 223 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 TMEM53Q6P2H8 277 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 RASSF6Q6ZTQ3 369 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 ASRGL1Q7L266 308 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 ADCK1Q86TW2 530 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 AQP11Q8NBQ7 271 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 DDOQ99489 341 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 PLA2G12AQ9BZM1 189 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 SYT4Q9H2B2 425 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 MMADHCQ9H3L0 296 aaPredicted RBP13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 EGLN3Q9H6Z9 239 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 POLE4Q9NR33 117 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 DLL4Q9NR61 685 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms