RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 NECAP1Q8NC96 275 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 OR13C2Q8NGS9 318 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 SCFD1Q8WVM8 642 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 SHC3Q92529 594 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 CREB3L1Q96BA8 519 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 C10orf35Q96D05 121 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 HSFY1Q96LI6 401 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 FOXC2Q99958 501 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 SH3GL1Q99961 368 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 PPA2Q9H2U2 334 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 AZI2Q9H6S1 392 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 POLE4Q9NR33 117 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 GPATCH2LQ9NWQ4 482 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 PIGLQ9Y2B2 252 aa1.77□□□□□ -2.13
VPS13C-207ENST00000558919 SGK1O00141 431 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 MPHOSPH10O00566 681 aaKnown RBP1.76□□□□□ -2.13
VPS13C-207ENST00000558919 CCL21O00585 134 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 RP2O75695 350 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 PALMO75781 387 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 HRH1P35367 487 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 SERPINB5P36952 375 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 EPS15P42566 896 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 CDKN2BP42772 138 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 CX3CR1P49238 355 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 IRX3P78415 501 aaPredicted RBP1.76□□□□□ -2.13
VPS13C-207ENST00000558919 TCP10Q12799 353 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 ZMYND11Q15326 602 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 RABL6Q3YEC7 729 aaPredicted RBP1.76□□□□□ -2.13
VPS13C-207ENST00000558919 FAM78AQ5JUQ0 283 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 RUFY3Q7L099 469 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 HDDC2Q7Z4H3 204 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 DHDDSQ86SQ9 333 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 LHFPL3Q86UP9 236 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 OR8J1Q8NGP2 316 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 OR2G2Q8NGZ5 317 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 RNF139Q8WU17 664 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 ABHD3Q8WU67 409 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 TMEM54Q969K7 222 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 NT5C3BQ969T7 300 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 NARS2Q96I59 477 aaKnown RBP1.76□□□□□ -2.13
VPS13C-207ENST00000558919 ZNF382Q96SR6 550 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 DOK1Q99704 481 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 RARRES2Q99969 163 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 SYNDIG1Q9H7V2 258 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 UBE2ZQ9H832 354 aaPredicted RBP1.76□□□□□ -2.13
VPS13C-207ENST00000558919 ASB3Q9Y575 518 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 IKBKGQ9Y6K9 419 aa1.76□□□□□ -2.13
VPS13C-207ENST00000558919 ADAMTS13Q76LX8 1427 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 DOCK8Q8NF50 2099 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 KIR2DS1A0A191URI9 304 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 ZNF233A6NK53 670 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 OR52A4PA6NMU1 304 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 ZNF850A8MQ14 1090 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 EIF3GO75821 320 aaKnown RBP eCLIP1.75□□□□□ -2.13
VPS13C-207ENST00000558919 CCNKO75909 580 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 RAB3DO95716 219 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 IGHDP01880 384 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 HLA-DPB1P04440 258 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 GNAO1P09471 354 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 NCK1P16333 377 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 MX1P20591 662 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 ATP5C1P36542 298 aaKnown RBP1.75□□□□□ -2.13
VPS13C-207ENST00000558919 RFX3P48380 749 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 RORCP51449 518 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 CDH4P55283 916 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 FBXW4P57775 412 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 SEC61GP60059 68 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 MRPL28Q13084 256 aaKnown RBP1.75□□□□□ -2.13
VPS13C-207ENST00000558919 DDX39BQ13838 428 aaKnown RBP1.75□□□□□ -2.13
VPS13C-207ENST00000558919 KIR2DS1Q14954 304 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 IGFBP7Q16270 282 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 MAJINQ3KP22 176 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 C6orf226Q5I0X4 101 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 CTSL3PQ5NE16 218 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 PHYHD1Q5SRE7 291 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 TEX43Q6ZNM6 134 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 H2BFWTQ7Z2G1 175 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 KRTAP13-1Q8IUC0 172 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 TGIF2LXQ8IUE1 241 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 LGI3Q8N145 548 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 OR1L4Q8NGR5 311 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 RBMXL1Q96E39 390 aaKnown RBP1.75□□□□□ -2.13
VPS13C-207ENST00000558919 L3HYPDHQ96EM0 354 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 ZNF681Q96N22 645 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 NAP1L5Q96NT1 182 aaPredicted RBP1.75□□□□□ -2.13
VPS13C-207ENST00000558919 MYCBPQ99417 103 aaPredicted RBP1.75□□□□□ -2.13
VPS13C-207ENST00000558919 CNN2Q99439 309 aaKnown RBP1.75□□□□□ -2.13
VPS13C-207ENST00000558919 P2RX4Q99571 388 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 RNF5Q99942 180 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 GON7Q9BXV9 100 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 GCOM2Q9BZD3 368 aaPredicted RBP1.75□□□□□ -2.13
VPS13C-207ENST00000558919 NMRAL1Q9HBL8 299 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 HYPKQ9NX55 129 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 ZNF639Q9UID6 485 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 NPTNQ9Y639 398 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 S4R3C0 116 aa1.75□□□□□ -2.13
VPS13C-207ENST00000558919 YEATS2Q9ULM3 1422 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 DHX57Q6P158 1386 aaKnown RBP1.74□□□□□ -2.13
VPS13C-207ENST00000558919 A0A1B0GVL5 298 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 A0A1W2PPE3 182 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms