RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CDRT1O95170 752 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 ABHD16AO95870 558 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 GPANK1O95872 356 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 OR8G3PP0DMU2 310 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 KLK2P20151 261 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 LAP3P28838 519 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 RPS19P39019 145 aaKnown RBP11.11□□□□□ -0.63
SHMT2-233ENST00000557529 RFC3P40938 356 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 MAGEA5P43359 124 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 EIF1AXP47813 144 aaKnown RBP11.11□□□□□ -0.63
SHMT2-233ENST00000557529 CSNK1A1P48729 337 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 STARP49675 285 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 SUCLG1P53597 346 aaKnown RBP11.11□□□□□ -0.63
SHMT2-233ENST00000557529 ROM1Q03395 351 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 SLC10A1Q14973 349 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 BCL2A1Q16548 175 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 PCK2Q16822 640 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 SLC25A47Q6Q0C1 308 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 RPTNQ6XPR3 784 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-233ENST00000557529 WDFY1Q8IWB7 410 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 MEIOBQ8N635 442 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 OR10H5Q8NGA6 315 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 ABHD4Q8TB40 342 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 RPS4Y2Q8TD47 263 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 SLC39A7Q92504 469 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 GHSRQ92847 366 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 PGLYRP3Q96LB9 341 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 OR8B4Q96RC9 309 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 UCN2Q96RP3 112 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 CDADC1Q9BWV3 514 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 PLGRKTQ9HBL7 147 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 PAQR5Q9NXK6 330 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-233ENST00000557529 CRNNQ9UBG3 495 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-233ENST00000557529 KCNG2Q9UJ96 466 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 KLK13Q9UKR3 277 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 RCE1Q9Y256 329 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 GRIP1Q9Y3R0 1128 aa11.11□□□□□ -0.63
SHMT2-233ENST00000557529 PTPRZ1P23471 2315 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-233ENST00000557529 CNTRLQ7Z7A1 2325 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 IGHV3-15A0A0B4J1V0 119 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 TRAV17A0A0B4J275 112 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 CD8B2A6NJW9 211 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 PRR32B1ATL7 298 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 H0YC42 278 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 LRRTM2O43300 516 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 UPK3AO75631 287 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 ACTL6AO96019 429 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 CELA3AP09093 270 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 INHBBP09529 407 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 CD8BP10966 210 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 PSMB10P40306 273 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 LHX2P50458 406 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 CLDN15P56746 228 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 FOXC1Q12948 553 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 DCTN2Q13561 401 aaKnown RBP11.1□□□□□ -0.63
SHMT2-233ENST00000557529 EIF2B1Q14232 305 aaKnown RBP11.1□□□□□ -0.63
SHMT2-233ENST00000557529 LIPNQ5VXI9 398 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 CARD17Q5XLA6 110 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 ABLIM2Q6H8Q1 611 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF544Q6NX49 715 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 TMEM91Q6ZNR0 172 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF679Q8IYX0 411 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 TEX19Q8NA77 164 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 OR6N1Q8NGY5 312 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 NEIL3Q8TAT5 605 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 PHYHIPQ92561 330 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 NSMAFQ92636 917 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 TMEM54Q969K7 222 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 MCHR2Q969V1 340 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 SLC25A46Q96AG3 418 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 FOXN4Q96NZ1 517 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 OR2M2Q96R28 347 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 MROQ9BYG7 248 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 WDR12Q9GZL7 423 aaKnown RBP11.1□□□□□ -0.63
SHMT2-233ENST00000557529 HMG20AQ9NP66 347 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 SNTG1Q9NSN8 517 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 SLCO1C1Q9NYB5 712 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 GLTPQ9NZD2 209 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 PEX16Q9Y5Y5 336 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 KCNMB2Q9Y691 235 aa11.1□□□□□ -0.63
SHMT2-233ENST00000557529 IGKV1D-43A0A0B4J1Z2 117 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 A0A1W2PPL8 197 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF716A6NP11 495 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 CLDN25C9JDP6 229 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 KLK10O43240 276 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF254O75437 659 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 SC5DO75845 299 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 GATBO75879 557 aaKnown RBP11.09□□□□□ -0.63
SHMT2-233ENST00000557529 QDPRP09417 244 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF708P17019 499 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 S100A5P33763 92 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 SDC2P34741 201 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 OPRL1P41146 370 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 RPS27P42677 84 aaKnown RBP11.09□□□□□ -0.63
SHMT2-233ENST00000557529 MTNR1BP49286 362 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 BMXP51813 675 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF133P52736 654 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-233ENST00000557529 CLDN18P56856 261 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms