RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 FANK1Q8TC84 345 aa13.77□□□□□ -0.21
TUBB3-214ENST00000557490 GNPDA2Q8TDQ7 276 aa13.77□□□□□ -0.21
TUBB3-214ENST00000557490 SLC7A6OSQ96CW6 309 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-214ENST00000557490 C18orf12Q96KH6 178 aa13.77□□□□□ -0.21
TUBB3-214ENST00000557490 Q96M85 177 aa13.77□□□□□ -0.21
TUBB3-214ENST00000557490 GPX7Q96SL4 187 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-214ENST00000557490 GPA33Q99795 319 aa13.77□□□□□ -0.21
TUBB3-214ENST00000557490 SIAEQ9HAT2 523 aa13.77□□□□□ -0.21
TUBB3-214ENST00000557490 NOX3Q9HBY0 568 aa13.77□□□□□ -0.21
TUBB3-214ENST00000557490 ZNF224Q9NZL3 707 aa13.77□□□□□ -0.21
TUBB3-214ENST00000557490 ADAM18Q9Y3Q7 739 aa13.77□□□□□ -0.21
TUBB3-214ENST00000557490 LYVE1Q9Y5Y7 322 aa13.77□□□□□ -0.21
TUBB3-214ENST00000557490 ZANQ9Y493 2812 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 IGHV2OR16-5A0A0B4J2B6 119 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 VSTM5A8MXK1 200 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 AHCYL1O43865 530 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 ATP5HO75947 161 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 HEXAP06865 529 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 PATE4P0C8F1 98 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 RAP2AP10114 183 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 BMP4P12644 408 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 SDHAP31040 664 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 CDKN1AP38936 164 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 RASSF2P50749 326 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 RPS6KA3P51812 740 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 HMGA2P52926 109 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 MRPS34P82930 218 aaKnown RBP13.76□□□□□ -0.21
TUBB3-214ENST00000557490 RAB39AQ14964 217 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 SGCAQ16586 387 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 OR2T5Q6IEZ7 315 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 PGM2L1Q6PCE3 622 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 FAM122BQ7Z309 247 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 MYPOPQ86VE0 399 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-214ENST00000557490 KRTAP1-3Q8IUG1 177 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 CLDN22Q8N7P3 220 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 OR2T29Q8NH02 315 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 HTRA1Q92743 480 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 MS4A3Q96HJ5 214 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 REEP1Q9H902 201 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 NRIP3Q9NQ35 241 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 CA10Q9NS85 328 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 IL20RAQ9UHF4 553 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 UGT2A1Q9Y4X1 527 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 IER3IP1Q9Y5U9 82 aa13.76□□□□□ -0.21
TUBB3-214ENST00000557490 IGKV1D-43A0A0B4J1Z2 117 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 TEX13CA0A0J9YWL9 993 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 PRSS37A4D1T9 235 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 H7C1C5 153 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 CCNB2O95067 398 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 INHBBP09529 407 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 ZNF14P17017 642 aaPredicted RBP13.75□□□□□ -0.21
TUBB3-214ENST00000557490 HOXB6P17509 224 aaKnown RBP13.75□□□□□ -0.21
TUBB3-214ENST00000557490 SLC6A6P31641 620 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 CDAP32320 146 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 LCN6P62502 163 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 TSPAN31Q12999 210 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 KRR1Q13601 381 aaKnown RBP13.75□□□□□ -0.21
TUBB3-214ENST00000557490 FLOT2Q14254 428 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 RFX4Q33E94 735 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 MESTQ5EB52 335 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 C1orf94Q6P1W5 598 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 PGBD2Q6P3X8 592 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 VHLLQ6RSH7 139 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 THSD4Q6ZMP0 1018 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 LRRC18Q8N456 261 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 NUP37Q8NFH4 326 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 OR4C15Q8NGM1 316 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 FGFBP3Q8TAT2 258 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 RASD2Q96D21 266 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 ZNF75AQ96N20 296 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 CHID1Q9BWS9 393 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 CACNG6Q9BXT2 260 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 CCNB1IP1Q9NPC3 277 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 SAMHD1Q9Y3Z3 626 aaKnown RBP13.75□□□□□ -0.21
TUBB3-214ENST00000557490 SPEF1Q9Y4P9 236 aa13.75□□□□□ -0.21
TUBB3-214ENST00000557490 A0A1W2PPL8 197 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 DHRS12A0PJE2 317 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 SLC22A23A1A5C7 686 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 GSC2O15499 205 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 PTHP01270 115 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 SERPINA5P05154 406 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 APEHP13798 732 aaKnown RBP13.74□□□□□ -0.21
TUBB3-214ENST00000557490 SERPINF1P36955 418 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 GSSP48637 474 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 FXYD6P3P58550 94 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 GALK2Q01415 458 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 HGFACQ04756 655 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 PLP2Q04941 152 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 DAG1Q14118 895 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 C11orf71Q6IPW1 123 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 ADCK1Q86TW2 530 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 SPATA24Q86W54 205 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 ADGRG5Q8IZF4 528 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 FBXO17Q96EF6 278 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 Q96MF0 132 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 OR52D1Q9H346 318 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 C1orf198Q9H425 327 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 BARX1Q9HBU1 254 aaPredicted RBP13.74□□□□□ -0.21
TUBB3-214ENST00000557490 PMF1-BGLAPU3KQ54 211 aa13.74□□□□□ -0.21
TUBB3-214ENST00000557490 ARID1AO14497 2285 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms