RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 SLC22A2O15244 555 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 PIP5K1CO60331 668 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 KRT34O76011 436 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 TFP02787 698 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 ZNF250P15622 560 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 APLNRP35414 380 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 RAD52P43351 418 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 DVL1P1P54792 670 aaPredicted RBP12.13□□□□□ -0.47
SNX6-210ENST00000557341 UCP2P55851 309 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 ERVS71-1P61550 626 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 FMODQ06828 376 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 TOP3AQ13472 1001 aaPredicted RBP12.13□□□□□ -0.47
SNX6-210ENST00000557341 TAF11Q15544 211 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 ALG10Q5BKT4 473 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 TMEM154Q6P9G4 183 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 ARPINQ7Z6K5 226 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 MICU2Q8IYU8 434 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 ICA1LQ8NDH6 482 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 CLDND2Q8NHS1 167 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 C11orf40Q8WZ69 217 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 LZICQ8WZA0 190 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 YIPF5Q969M3 257 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 NABP1Q96AH0 204 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 BPIFA2Q96DR5 249 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 TXNIPQ9H3M7 391 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 NARFLQ9H6Q4 476 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 SIAEQ9HAT2 523 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 SLCO1C1Q9NYB5 712 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 TAAR3PQ9P1P4 343 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 CLPTM1O96005 669 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 IGHMP01871 453 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 MT-ND5P03915 603 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 IFI30P13284 250 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 COL8A2P25067 703 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 CDAP32320 146 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 SRP14P37108 136 aaKnown RBP12.12□□□□□ -0.47
SNX6-210ENST00000557341 MAGEB1P43366 347 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 TMEM33P57088 247 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 SELENOWP63302 87 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 PCGF3Q3KNV8 242 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 PABPC1L2AQ5JQF8 200 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 RINLQ6ZS11 566 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 GLCCI1Q86VQ1 547 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 OFCC1Q8IZS5 231 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 FNDC8Q8TC99 324 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 NSMAFQ92636 917 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 HDAC2Q92769 488 aaKnown RBP12.12□□□□□ -0.47
SNX6-210ENST00000557341 RCN3Q96D15 328 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 NMD3Q96D46 503 aaKnown RBP12.12□□□□□ -0.47
SNX6-210ENST00000557341 TSPAN32Q96QS1 320 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 ALG12Q9BV10 488 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 C19orf24Q9BVV8 132 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 HINT3Q9NQE9 182 aaKnown RBP12.12□□□□□ -0.47
SNX6-210ENST00000557341 A4GNTQ9UNA3 340 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 AP3M1Q9Y2T2 418 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 UGT2A1Q9Y4X1 527 aa12.12□□□□□ -0.47
SNX6-210ENST00000557341 IGKV1D-43A0A0B4J1Z2 117 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 PPIHO43447 177 aaKnown RBP12.11□□□□□ -0.47
SNX6-210ENST00000557341 RP2O75695 350 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 IFNW1P05000 195 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 ZNF32P17041 273 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 DRD4P21917 467 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 CCNOP22674 350 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 STOMP27105 288 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 RPL27P61353 136 aaKnown RBP12.11□□□□□ -0.47
SNX6-210ENST00000557341 SRSF2Q01130 221 aaKnown RBP12.11□□□□□ -0.47
SNX6-210ENST00000557341 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 MOGQ16653 247 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 LIPNQ5VXI9 398 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 FAM205BPQ63HN1 556 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 UNQ6126/PRO20091Q6UXV3 157 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 RFLNBQ8N5W9 214 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 CPEB3Q8NE35 698 aaKnown RBP12.11□□□□□ -0.47
SNX6-210ENST00000557341 OR1J1Q8NGS3 322 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 RACGAP1Q9H0H5 632 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 NKIRAS2Q9NYR9 191 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 ARMCX1Q9P291 453 aa12.11□□□□□ -0.47
SNX6-210ENST00000557341 DYSFO75923 2080 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 TCF21O43680 179 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 MSMBP08118 114 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 ERVK-25P63136 954 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 CCL8P80075 99 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 TEKQ02763 1124 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 TRAM2Q15035 370 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 SGCAQ16586 387 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 ANKDD1AQ495B1 522 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 THEM4Q5T1C6 240 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 SLC25A47Q6Q0C1 308 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 VTCN1Q7Z7D3 282 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 IGFN1Q86VF2 1251 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 NRMQ8IXM6 262 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 POU5F2Q8N7G0 328 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 GEMIN6Q8WXD5 167 aaKnown RBP12.1□□□□□ -0.47
SNX6-210ENST00000557341 FNDC11Q9BVV2 318 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 CCDC134Q9H6E4 229 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 MAN2C1Q9NTJ4 1040 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 EIF3KQ9UBQ5 218 aaKnown RBP12.1□□□□□ -0.47
SNX6-210ENST00000557341 GRIP1Q9Y3R0 1128 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 WNK2Q9Y3S1 2297 aa12.1□□□□□ -0.47
SNX6-210ENST00000557341 TRAV27A0A087WT01 109 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms