RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SIAEQ9HAT2 523 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 PLGRKTQ9HBL7 147 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF160Q9HCG1 818 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 EXOSC4Q9NPD3 245 aaKnown RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 SERINC1Q9NRX5 453 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 MED11Q9P086 117 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 GRHPRQ9UBQ7 328 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 FBXO9Q9UK97 447 aaPredicted RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 STUB1Q9UNE7 303 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 MOKQ9UQ07 419 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 CAB39Q9Y376 341 aaPredicted RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 WIF1Q9Y5W5 379 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 SPIN1Q9Y657 262 aaPredicted RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 HS3ST3B1Q9Y662 390 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 CPAMD8Q8IZJ3 1885 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 A0A087WZY1 265 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 TMEM72A0PK05 275 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 CCDC182A6NF36 153 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 C12orf71A8MTZ7 269 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 C21orf140B9A014 251 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 J3QRE1 110 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 NKX2-8O15522 239 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF208O43345 1280 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF354AO60765 605 aaPredicted RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 TRIM3O75382 744 aaPredicted RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 TXNDC12O95881 172 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 HPP00738 406 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 MT-ND5P03915 603 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SBK2P0C263 348 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 OR2T7P0C7T2 308 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 LIMS3P0CW19 117 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 LIMS4P0CW20 117 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 TFPIP10646 304 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SLC2A5P22732 501 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 FKBP2P26885 142 aaKnown RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 GTF2E2P29084 291 aaKnown RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 UQCRC1P31930 480 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SOX6P35712 828 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SOX3P41225 446 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 EIF1P41567 113 aaKnown RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 CASP3P42574 277 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 CENPAP49450 140 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 DIO1P49895 249 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SLC25A1P53007 311 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 DLX5P56178 289 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 MLF1P58340 268 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 BDH1Q02338 343 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 RPL18Q07020 188 aaKnown RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 ACSM1Q08AH1 577 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 MALLQ13021 153 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 DCTN2Q13561 401 aaKnown RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 GPR50Q13585 617 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 DNASE1L3Q13609 305 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 IL10RAQ13651 578 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SSX1Q16384 188 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SGCBQ16585 318 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SLC25A53Q5H9E4 307 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 OR5M10Q6IEU7 315 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 TMEM81Q6P7N7 255 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 PAQR6Q6TCH4 344 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 PPP1R32Q7Z5V6 425 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 RAB43Q86YS6 212 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 CROCCP3Q8IVE0 287 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 GPALPP1Q8IXQ4 340 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 TMEM156Q8N614 296 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 LRRC75AQ8NAA5 344 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 CYB561A3Q8NBI2 242 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 NPEPL1Q8NDH3 523 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SDR9C7Q8NEX9 313 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 NLGN4YQ8NFZ3 816 aaPredicted RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 OR10G3Q8NGC4 313 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 OR4K17Q8NGC6 315 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 OR2T27Q8NH04 317 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 OR5J2Q8NH18 312 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 MCFD2Q8NI22 146 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 NDNFQ8TB73 568 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 DYNC2LI1Q8TCX1 351 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 S100ZQ8WXG8 99 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SMPDL3BQ92485 455 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 RPL3LQ92901 407 aaKnown RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 MRGPRX4Q96LA9 322 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 Q96M85 177 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 CNN2Q99439 309 aaKnown RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 HCAR1Q9BXC0 346 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 POTEKPQ9BYX7 375 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 SPRY4Q9C004 299 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 WDR12Q9GZL7 423 aaKnown RBP6.11□□□□□ -1.43
SLIRP-204ENST00000555890 OR51E2Q9H255 320 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 MMP27Q9H306 513 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 CDCP1Q9H5V8 836 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 KLHL1Q9NR64 748 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 INIPQ9NRY2 104 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 NDUFB11Q9NX14 153 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 FBLN5Q9UBX5 448 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 GSTK1Q9Y2Q3 226 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 ADAM18Q9Y3Q7 739 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 NOX1Q9Y5S8 564 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 A3GALT2U3KPV4 340 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 EML6Q6ZMW3 1958 aa6.11□□□□□ -1.43
SLIRP-204ENST00000555890 TNRC6AQ8NDV7 1962 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms