RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 TMUB1Q9BVT8 246 aa8.46□□□□□ -1.06
ACTN1-215ENST00000555616 UBTD1Q9HAC8 227 aa8.46□□□□□ -1.06
ACTN1-215ENST00000555616 BATF3Q9NR55 127 aa8.46□□□□□ -1.06
ACTN1-215ENST00000555616 CMC2Q9NRP2 79 aa8.46□□□□□ -1.06
ACTN1-215ENST00000555616 B3GAT1Q9P2W7 334 aa8.46□□□□□ -1.06
ACTN1-215ENST00000555616 RAI1Q7Z5J4 1906 aaPredicted RBP8.46□□□□□ -1.06
ACTN1-215ENST00000555616 MPDZO75970 2070 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 TEX13CA0A0J9YWL9 993 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 OR5H1A6NKK0 313 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 SNTNA6NMZ2 147 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 SURF4O15260 269 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 TRAF3IP2O43734 574 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-215ENST00000555616 TLX2O43763 284 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-215ENST00000555616 RENP00797 406 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 IGHV3-9P01782 118 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 NR2C1P13056 603 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 IFNGR1P15260 489 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 SNRPGP62308 76 aaKnown RBP8.45□□□□□ -1.06
ACTN1-215ENST00000555616 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.45□□□□□ -1.06
ACTN1-215ENST00000555616 KRR1Q13601 381 aaKnown RBP8.45□□□□□ -1.06
ACTN1-215ENST00000555616 MAD2L1BPQ15013 274 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-215ENST00000555616 TIMM23BQ5SRD1 257 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 NCMAPQ5T1S8 102 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 ADAM5Q6NVV9 412 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 FAM122BQ7Z309 247 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 ENTHD1Q8IYW4 607 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 LRRC75A-AS1Q8N1F1 130 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 TCEANCQ8N8B7 351 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 ZIC4Q8N9L1 334 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 OR52E2Q8NGJ4 325 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 OR4K13Q8NH42 304 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 TMEM163Q8TC26 289 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 ASB10Q8WXI3 467 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 RFKQ969G6 155 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 PIGTQ969N2 578 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 RASD2Q96D21 266 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 Q96M85 177 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 TSPAN32Q96QS1 320 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 IL4I1Q96RQ9 567 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 CCL19Q99731 98 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 FN3KQ9H479 309 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 ESRP2Q9H6T0 727 aaKnown RBP8.45□□□□□ -1.06
ACTN1-215ENST00000555616 ZNF696Q9H7X3 374 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 NGBQ9NPG2 151 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 PARPBPQ9NWS1 579 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 CLN6Q9NWW5 311 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 ASB6Q9NWX5 421 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 TAS2R16Q9NYV7 291 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 ZNF346Q9UL40 294 aaKnown RBP8.45□□□□□ -1.06
ACTN1-215ENST00000555616 RNF115Q9Y4L5 304 aa8.45□□□□□ -1.06
ACTN1-215ENST00000555616 SETD2Q9BYW2 2564 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-215ENST00000555616 ZNF726A6NNF4 738 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 PRR23D1E9PI22 279 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-215ENST00000555616 HS3ST1O14792 307 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 AHCYL1O43865 530 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 PRKYO43930 277 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 TMCC2O75069 709 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 RAD51DO75771 328 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 PLAUP00749 431 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 IGHG1P01857 330 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 ITGA5P08648 1049 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 PRR23D2P0DMB1 279 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-215ENST00000555616 HLA-DOBP13765 273 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 HIST1H1CP16403 213 aaKnown RBP8.44□□□□□ -1.06
ACTN1-215ENST00000555616 HOXC12P31275 282 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 ACVR1BP36896 505 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 BIDP55957 195 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 CLDN17P56750 224 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 ISL1P61371 349 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 ADAM8P78325 824 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 TEKQ02763 1124 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 BSPH1Q075Z2 132 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 LGALS3BPQ08380 585 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 CD47Q08722 323 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 PPA1Q15181 289 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 STK11Q15831 433 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 KCTD21Q4G0X4 260 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 ARMC4Q5T2S8 1044 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 MEDAGQ5VYS4 303 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 TMEM154Q6P9G4 183 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 CREB3L2Q70SY1 520 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 CXXC5Q7LFL8 322 aaKnown RBP8.44□□□□□ -1.06
ACTN1-215ENST00000555616 UBE2J2Q8N2K1 259 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 C17orf78Q8N4C9 275 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 ZNF611Q8N823 705 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 C1orf162Q8NEQ5 155 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-215ENST00000555616 OR6X1Q8NH79 312 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 RHOXF1Q8NHV9 184 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 ZNF519Q8TB69 540 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 FNDC8Q8TC99 324 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 OTULINQ96BN8 352 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 ZNF385AQ96PM9 386 aaKnown RBP8.44□□□□□ -1.06
ACTN1-215ENST00000555616 SNX18Q96RF0 628 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 YTHDF1Q9BYJ9 559 aaKnown RBP8.44□□□□□ -1.06
ACTN1-215ENST00000555616 DLL4Q9NR61 685 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 SLC7A10Q9NS82 523 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 MED29Q9NX70 200 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 H2AFY2Q9P0M6 372 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-215ENST00000555616 RCE1Q9Y256 329 aa8.44□□□□□ -1.06
ACTN1-215ENST00000555616 MYRFQ9Y2G1 1151 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms