RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ZNF735P0CB33 412 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 CD99P14209 185 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 YAP1P46937 504 aaKnown RBP1.25□□□□□ -2.21
SNX6-204ENST00000555541 TCP10Q12799 353 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 IFT88Q13099 833 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 ARHGAP19Q14CB8 494 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 SLC36A3Q495N2 470 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 ASCL5Q7RTU5 278 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 TMEM135Q86UB9 458 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 PRSS58Q8IYP2 241 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 OR13G1Q8NGZ3 307 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 CCDC110Q8TBZ0 833 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 SLC25A46Q96AG3 418 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 FAM3DQ96BQ1 224 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 P2RX4Q99571 388 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 ANGPTL4Q9BY76 406 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 FRMD8P1Q9BZ68 369 aaPredicted RBP1.25□□□□□ -2.21
SNX6-204ENST00000555541 CGNQ9P2M7 1197 aaKnown RBP1.25□□□□□ -2.21
SNX6-204ENST00000555541 UVRAGQ9P2Y5 699 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 CDH9Q9ULB4 789 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 SAMHD1Q9Y3Z3 626 aaKnown RBP1.25□□□□□ -2.21
SNX6-204ENST00000555541 KIF3AQ9Y496 699 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 IKBKGQ9Y6K9 419 aa1.25□□□□□ -2.21
SNX6-204ENST00000555541 SCN4AP35499 1836 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 METTL21EPA6NDL7 271 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 ZNF98A6NK75 572 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 MRPS12O15235 138 aaKnown RBP1.24□□□□□ -2.21
SNX6-204ENST00000555541 SOCS1O15524 211 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 FCMRO60667 390 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 OR7A10O76100 309 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 CT62P0C5K7 136 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 ATP6V1C1P21283 382 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 DCKP27707 260 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 TNFSF9P41273 254 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 MEF2CQ06413 473 aaPredicted RBP1.24□□□□□ -2.21
SNX6-204ENST00000555541 OAFQ86UD1 273 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 LHFPL3Q86UP9 236 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 OR2G2Q8NGZ5 317 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 TTC25Q96NG3 672 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 PARD6BQ9BYG5 372 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 FN3KRPQ9HA64 309 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 N6AMT1Q9Y5N5 214 aa1.24□□□□□ -2.21
SNX6-204ENST00000555541 GPRASP1Q5JY77 1395 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 ARPC4-TTLL3A0A0A6YYG9 625 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 ARPC3O15145 178 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 EIF3GO75821 320 aaKnown RBP eCLIP1.23□□□□□ -2.21
SNX6-204ENST00000555541 DTYMKP23919 212 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 HSD17B2P37059 387 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 CDKN1BP46527 198 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 GDI2P50395 445 aaKnown RBP1.23□□□□□ -2.21
SNX6-204ENST00000555541 RPS11P62280 158 aaKnown RBP eCLIP1.23□□□□□ -2.21
SNX6-204ENST00000555541 RIPPLY2Q5TAB7 128 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 OR4F3Q6IEY1 312 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 HCP5Q6MZN7 132 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 TMEM105Q8N8V8 129 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 APCDD1LQ8NCL9 501 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 PHOSPHO2Q8TCD6 241 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.23□□□□□ -2.21
SNX6-204ENST00000555541 SENP8Q96LD8 212 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 HSFY1Q96LI6 401 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 MTMR9Q96QG7 549 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 TCHPQ9BT92 498 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 THUMPD2Q9BTF0 503 aaKnown RBP1.23□□□□□ -2.21
SNX6-204ENST00000555541 MFFQ9GZY8 342 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 POLE3Q9NRF9 147 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 TAS2R3Q9NYW6 316 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 TMOD2Q9NZR1 351 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 ZSWIM8A7E2V4 1837 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 CACNA1DQ01668 2161 aa1.23□□□□□ -2.21
SNX6-204ENST00000555541 SVILO95425 2214 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 IGHV1OR15-9A0A0B4J2B8 117 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 A0A1B0GWJ7 208 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 SPECC1L-ADORA2AF8WAN1 911 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 CCL21O00585 134 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 TBX19O60806 448 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 SCGNO76038 276 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 IL1RNP18510 177 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 MAS1LP35410 378 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 ATP5C1P36542 298 aaKnown RBP1.22□□□□□ -2.21
SNX6-204ENST00000555541 SNRNP35Q16560 246 aaKnown RBP1.22□□□□□ -2.21
SNX6-204ENST00000555541 PDK4Q16654 411 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 SPECC1LQ69YQ0 1117 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 SASS6Q6UVJ0 657 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 ENPP6Q6UWR7 440 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 FBXW12Q6X9E4 464 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 LINC00336Q6ZUF6 198 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 SLC16A13Q7RTY0 426 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 ARL10Q8N8L6 244 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 SPANXA2-OT1Q8N9U9 137 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 OR5M1Q8NGP8 315 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 DNAJC1Q96KC8 554 aaKnown RBP1.22□□□□□ -2.21
SNX6-204ENST00000555541 TBL1YQ9BQ87 522 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 NIPAL2Q9H841 368 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 ODF2LQ9ULJ1 636 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 AURKCQ9UQB9 309 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 ATP10AO60312 1499 aa1.22□□□□□ -2.21
SNX6-204ENST00000555541 KIF16BQ96L93 1317 aa1.21□□□□□ -2.22
SNX6-204ENST00000555541 CENPVL3A0A0U1RRI6 287 aa1.21□□□□□ -2.22
SNX6-204ENST00000555541 H0YJW9 148 aa1.21□□□□□ -2.22
SNX6-204ENST00000555541 FOXE1O00358 373 aaPredicted RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms