RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 MCOLN2Q8IZK6 566 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 PUSL1Q8N0Z8 303 aaKnown RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 PDIK1LQ8N165 341 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 AQP11Q8NBQ7 271 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 OR2AP1Q8NGE2 309 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 OR51F2Q8NH61 342 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 ZNF564Q8TBZ8 553 aaPredicted RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 LGALS14Q8TCE9 139 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 CXorf40AQ8TE69 158 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 ACOT11Q8WXI4 607 aaPredicted RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 RASL10AQ92737 203 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 OR5B12Q96R08 314 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 UTP23Q9BRU9 249 aaKnown RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 ANGPTL4Q9BY76 406 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 NMUR2Q9GZQ4 415 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 FOLH1BQ9HBA9 442 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 SDHAF3Q9NRP4 125 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 DCDC2Q9UHG0 476 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 UBQLN1Q9UMX0 589 aaKnown RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 TSSC4Q9Y5U2 329 aaPredicted RBP4.07□□□□□ -1.76
VRK1-203ENST00000555067 V9GYY9 64 aa4.07□□□□□ -1.76
VRK1-203ENST00000555067 AQRO60306 1485 aaKnown RBP eCLIP4.06□□□□□ -1.767e-7■■□□□ 11.4
VRK1-203ENST00000555067 ANKRD30BQ9BXX2 1392 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 IGHV4-30-2A0A087WSY4 118 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 TSPAN11A1L157 253 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 MGAT4DA6NG13 374 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 FOXI3A8MTJ6 420 aaPredicted RBP4.06□□□□□ -1.76
VRK1-203ENST00000555067 RNASEK-C17orf49H0YIS7 233 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 CDC7O00311 574 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 LALBAP00709 142 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 ZNF250P15622 560 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 CAPN2P17655 700 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 P2RY2P41231 377 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 ACTA2P62736 377 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 ACTG2P63267 376 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 ACTC1P68032 377 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 ACTA1P68133 377 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 SLC10A7Q0GE19 358 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 ABRAXAS2Q15018 415 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 MAPRE2Q15555 327 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 PGGHGQ32M88 737 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 SLC25A30Q5SVS4 291 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 ZNF691Q5VV52 312 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 UFSP1Q6NVU6 142 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 C1orf94Q6P1W5 598 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 TMIGD1Q6UXZ0 262 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 Q6ZR54 194 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 PLA2G4DQ86XP0 818 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 FTMTQ8N4E7 242 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 HSD17B11Q8NBQ5 300 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 OR6N2Q8NGY6 317 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 CDKL2Q92772 493 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 RPEQ96AT9 228 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 SLC25A38Q96DW6 304 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 CTRCQ99895 268 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 RARRES2Q99969 163 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 KLHDC3Q9BQ90 382 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 SOSTQ9BQB4 213 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 MED10Q9BTT4 135 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 CCDC28BQ9BUN5 200 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 OSBPL10Q9BXB5 764 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 ULBP2Q9BZM5 246 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 SYT4Q9H2B2 425 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 C1orf198Q9H425 327 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 RNF167Q9H6Y7 350 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 NECAP2Q9NVZ3 263 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 GNPTGQ9UJJ9 305 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 PLLPQ9Y342 182 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 URGCP-MRPS24S4R325 110 aa4.06□□□□□ -1.76
VRK1-203ENST00000555067 CROCCQ5TZA2 2017 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 GAKO14976 1311 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 RPL37AP8A6NKH3 93 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 SLC17A2O00624 439 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 ITGB1BP1O14713 200 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 TNFSF11O14788 317 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 IDH3BO43837 385 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 PLEKHA8P1O95397 391 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 SLC2A10O95528 541 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 LSM8O95777 96 aaKnown RBP4.05□□□□□ -1.76
VRK1-203ENST00000555067 HBE1P02100 147 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 KLK3P07288 261 aaPredicted RBP4.05□□□□□ -1.76
VRK1-203ENST00000555067 H2AFZP0C0S5 128 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 RD3LP0DJH9 198 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 CT45A10P0DMU9 189 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 TCN1P20061 433 aaPredicted RBP4.05□□□□□ -1.76
VRK1-203ENST00000555067 AQP2P41181 271 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 GSK3BP49841 420 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 SERPINB8P50452 374 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 CCR8P51685 355 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 BLVRAP53004 296 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 MRPS15P82914 257 aaKnown RBP4.05□□□□□ -1.76
VRK1-203ENST00000555067 CHRNB3Q05901 458 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 ECH1Q13011 328 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 PARP15Q460N3 678 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 VAX1Q5SQQ9 334 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 MARCH8Q5T0T0 291 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 PLCZ1Q86YW0 608 aa4.05□□□□□ -1.76
VRK1-203ENST00000555067 NRMQ8IXM6 262 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms