RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 P04436 131 aa15.58■□□□□ 0.08
SHOX-204ENST00000554971 UCHL1P09936 223 aa15.58■□□□□ 0.08
SHOX-204ENST00000554971 GSTT2P0CG29 244 aa15.58■□□□□ 0.08
SHOX-204ENST00000554971 GSTT2BP0CG30 244 aa15.58■□□□□ 0.08
SHOX-204ENST00000554971 CLUP10909 449 aa15.58■□□□□ 0.08
SHOX-204ENST00000554971 CNR1P21554 472 aa15.58■□□□□ 0.08
SHOX-204ENST00000554971 IFITM2Q01629 132 aa15.58■□□□□ 0.08
SHOX-204ENST00000554971 RPUSD3Q6P087 351 aaKnown RBP15.58■□□□□ 0.08
SHOX-204ENST00000554971 SNX33Q8WV41 574 aa15.58■□□□□ 0.08
SHOX-204ENST00000554971 RFT1Q96AA3 541 aa15.58■□□□□ 0.08
SHOX-204ENST00000554971 ARPC4-TTLL3A0A0A6YYG9 625 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 LRRC3CA6NJW4 275 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 MCIDASD6RGH6 385 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 PSKH1P11801 424 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 MEOX1P50221 254 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 TATDN3Q17R31 274 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 EMC4Q5J8M3 183 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 UNQ9370/PRO34162Q6UXP9 181 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 SAMD12Q8N8I0 201 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 ZFP62Q8NB50 900 aaPredicted RBP15.57■□□□□ 0.08
SHOX-204ENST00000554971 OR5J2Q8NH18 312 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 PELI1Q96FA3 418 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 THAP7Q9BT49 309 aaPredicted RBP15.57■□□□□ 0.08
SHOX-204ENST00000554971 MRI1Q9BV20 369 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 PPIL3Q9H2H8 161 aaKnown RBP15.57■□□□□ 0.08
SHOX-204ENST00000554971 METTL7AQ9H8H3 244 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 KLRF1Q9NZS2 232 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 HIF3AQ9Y2N7 669 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 TENM4Q6N022 2769 aa15.57■□□□□ 0.08
SHOX-204ENST00000554971 ELOA3DA6NLF2 546 aaPredicted RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 ZNF879B4DU55 563 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 ALG1L2C9J202 215 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 GLCEO94923 617 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 TFP02787 698 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 HPGDP15428 266 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 GDI2P50395 445 aaKnown RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 SNTA1Q13424 505 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 CD226Q15762 336 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 ELOA3BQ3SY89 546 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 CCDC92Q53HC0 331 aaPredicted RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 ZNF57Q68EA5 555 aaPredicted RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 MARCH3Q86UD3 253 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 NOXA1Q86UR1 476 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 WDSUB1Q8N9V3 476 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 SDR9C7Q8NEX9 313 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 ELOA3Q8NG57 546 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 RPS4Y2Q8TD47 263 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 ZMYND19Q96E35 227 aaPredicted RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 MNTQ99583 582 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 WACQ9BTA9 647 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 MALT1Q9UDY8 824 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 WIF1Q9Y5W5 379 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 A0A0G2JMP0 313 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 A0A0X1KG70 313 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 SCO2O43819 266 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 UBL3O95164 117 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 TXNDC12O95881 172 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 RFPL3SP0C7P2 107 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 AHCYP23526 432 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 ERP29P30040 261 aaKnown RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 SLC6A1P30531 599 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 ACVR1BP36896 505 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 SLC6A8P48029 635 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 NKX2-5P52952 324 aaPredicted RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 MRPS15P82914 257 aaKnown RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 CDK10Q15131 360 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 OR5M10Q6IEU7 315 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 ATG4DQ86TL0 474 aaPredicted RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 OR4M2Q8NGB6 313 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 OR4M1Q8NGD0 313 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 TRMT10AQ8TBZ6 339 aaKnown RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 FAM173AQ9BQD7 235 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 C7orf50Q9BRJ6 194 aaKnown RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 HDHD2Q9H0R4 259 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 NIPAL2Q9H841 368 aa15.56■□□□□ 0.08
SHOX-204ENST00000554971 ZNF275Q9NSD4 429 aaPredicted RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 NUFIP1Q9UHK0 495 aaKnown RBP15.56■□□□□ 0.08
SHOX-204ENST00000554971 GCN1Q92616 2671 aaKnown RBP15.55■□□□□ 0.08
SHOX-204ENST00000554971 KLRC4-KLRK1H3BQV0 150 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 SCDO00767 359 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 PDCD5O14737 125 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 FZD7O75084 574 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 GLSO94925 669 aaPredicted RBP15.55■□□□□ 0.08
SHOX-204ENST00000554971 GYPBP06028 91 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 CD14P08571 375 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 TACSTD2P09758 323 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 UBL4AP11441 157 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 SPI1P17947 270 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 SF3B4Q15427 424 aaKnown RBP eCLIP15.55■□□□□ 0.08
SHOX-204ENST00000554971 SSX6Q7RTT6 188 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 CDH24Q86UP0 819 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 ZNF843Q8N446 348 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 CISD2Q8N5K1 135 aaKnown RBP15.55■□□□□ 0.08
SHOX-204ENST00000554971 SNRNP40Q96DI7 357 aaKnown RBP15.55■□□□□ 0.08
SHOX-204ENST00000554971 KLHDC3Q9BQ90 382 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 TTTY12Q9BZ98 90 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 ING3Q9NXR8 418 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 COPZ2Q9P299 210 aa15.55■□□□□ 0.08
SHOX-204ENST00000554971 FASNP49327 2511 aaKnown RBP15.55■□□□□ 0.08
SHOX-204ENST00000554971 PCNX1Q96RV3 2341 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms