RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 RP2O75695 350 aa16.04■□□□□ 0.16
CPSF2-203ENST00000554290 MMP7P09237 267 aaPredicted RBP16.04■□□□□ 0.16
CPSF2-203ENST00000554290 TROVE2P10155 538 aaKnown RBP eCLIP16.04■□□□□ 0.16
CPSF2-203ENST00000554290 TNFRSF1BP20333 461 aa16.04■□□□□ 0.16
CPSF2-203ENST00000554290 DRD4P21917 467 aa16.04■□□□□ 0.16
CPSF2-203ENST00000554290 IFNA8P32881 189 aa16.04■□□□□ 0.16
CPSF2-203ENST00000554290 TEKQ02763 1124 aa16.04■□□□□ 0.16
CPSF2-203ENST00000554290 PIN1Q13526 163 aaPredicted RBP16.04■□□□□ 0.16
CPSF2-203ENST00000554290 MAPRE2Q15555 327 aa16.04■□□□□ 0.16
CPSF2-203ENST00000554290 UNQ6126/PRO20091Q6UXV3 157 aa16.04■□□□□ 0.16
CPSF2-203ENST00000554290 C10orf82Q8WW14 230 aa16.04■□□□□ 0.16
CPSF2-203ENST00000554290 GMNCA6NCL1 334 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 FAM157AC9JC47 383 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 FXYD1O00168 92 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 SHOX2O60902 331 aaPredicted RBP16.03■□□□□ 0.16
CPSF2-203ENST00000554290 TSPAN19P0C672 248 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 GAAP10253 952 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 ANPEPP15144 967 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 CCNOP22674 350 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 CRYBB2P43320 205 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 OR1E2P47887 323 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 ERVS71-1P61550 626 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 SCGB2A2Q13296 93 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 LAPTM4AQ15012 233 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 TAF11Q15544 211 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 PABPC1L2AQ5JQF8 200 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 ARMC4Q5T2S8 1044 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 PCYOX1LQ8NBM8 494 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 OR1J1Q8NGS3 322 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 OR51F2Q8NH61 342 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 MOSPD2Q8NHP6 518 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 ZNF583Q96ND8 569 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 TSPAN32Q96QS1 320 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 TXNIPQ9H3M7 391 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 OCEL1Q9H607 264 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 LPAR2Q9HBW0 351 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 DECR2Q9NUI1 292 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 GID8Q9NWU2 228 aa16.03■□□□□ 0.16
CPSF2-203ENST00000554290 EIF3KQ9UBQ5 218 aaKnown RBP16.03■□□□□ 0.16
CPSF2-203ENST00000554290 A0A0A6YYJ9 748 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 WNT9BO14905 357 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 TPD52L2O43399 206 aaKnown RBP16.02■□□□□ 0.16
CPSF2-203ENST00000554290 CDC14BO60729 498 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 SLC2A10O95528 541 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 ITGA2P17301 1181 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 STOMP27105 288 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 CDAP32320 146 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 KDELR2P33947 212 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 LMO4P61968 165 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 CD47Q08722 323 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 ST3GAL3Q11203 375 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 KLF10Q13118 480 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 SGCAQ16586 387 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 LRRC23Q53EV4 343 aaPredicted RBP16.02■□□□□ 0.16
CPSF2-203ENST00000554290 CYBRD1Q53TN4 286 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 SHQ1Q6PI26 577 aaKnown RBP16.02■□□□□ 0.16
CPSF2-203ENST00000554290 CPEB3Q8NE35 698 aaKnown RBP16.02■□□□□ 0.16
CPSF2-203ENST00000554290 FNDC8Q8TC99 324 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 LRRC37BQ96QE4 947 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 RBP7Q96R05 134 aa16.02■□□□□ 0.16
CPSF2-203ENST00000554290 METTL17Q9H7H0 456 aaPredicted RBP16.02■□□□□ 0.16
CPSF2-203ENST00000554290 TRAV20A0A0B4J274 112 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 IGHV1-69-2A0A0G2JMI3 117 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 IGHV3-13P01766 116 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 GCH1P30793 250 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 GUCA1AP43080 201 aaPredicted RBP16.01■□□□□ 0.15
CPSF2-203ENST00000554290 ARFIP2P53365 341 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 ZNF718Q3SXZ3 478 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 ALG10Q5BKT4 473 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 TEX29Q8N6K0 151 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 LZICQ8WZA0 190 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 NSMAFQ92636 917 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 HDAC2Q92769 488 aaKnown RBP16.01■□□□□ 0.15
CPSF2-203ENST00000554290 NMD3Q96D46 503 aaKnown RBP16.01■□□□□ 0.15
CPSF2-203ENST00000554290 TPD52L3Q96J77 140 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 HIF3AQ9Y2N7 669 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 UGT2A1Q9Y4X1 527 aa16.01■□□□□ 0.15
CPSF2-203ENST00000554290 LOC100653049A0A140TA62 436 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 C5orf49A4QMS7 147 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 KRT34O76011 436 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 ZNF32P17041 273 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 GDI2P50395 445 aaKnown RBP16■□□□□ 0.15
CPSF2-203ENST00000554290 RPL27P61353 136 aaKnown RBP16■□□□□ 0.15
CPSF2-203ENST00000554290 MVKQ03426 396 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 FMODQ06828 376 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 HFEQ30201 348 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 THEM4Q5T1C6 240 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 FAM27BQ5VT28 67 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 ACSM5Q6NUN0 579 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 FAHD2BQ6P2I3 314 aaPredicted RBP16■□□□□ 0.15
CPSF2-203ENST00000554290 SLC25A47Q6Q0C1 308 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 C1orf174Q8IYL3 243 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 ALDH16A1Q8IZ83 802 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 OR2T12Q8NG77 320 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 NABP1Q96AH0 204 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 BPIFA2Q96DR5 249 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 FAHD2AQ96GK7 314 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 TIMD4Q96H15 378 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 POM121L2Q96KW2 1035 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 ALG12Q9BV10 488 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms