RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 WDR31Q8NA23 367 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 SYT14Q8NB59 555 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 KBTBD8Q8NFY9 601 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 OR13C2Q8NGS9 318 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 GNPDA2Q8TDQ7 276 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 SMAP2Q8WU79 429 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-209ENST00000553855 ASB10Q8WXI3 467 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 TMEM54Q969K7 222 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 MBD6Q96DN6 1003 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 BOD1Q96IK1 185 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 RSRC1Q96IZ7 334 aaKnown RBP7.28□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF570Q96NI8 536 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 TNFRSF13CQ96RJ3 184 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 FOXC2Q99958 501 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 TMEM204Q9BSN7 226 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 ALG12Q9BV10 488 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 LRMDAQ9H2I8 198 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 LIME1Q9H400 295 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 DENND2DQ9H6A0 471 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-209ENST00000553855 REEP1Q9H902 201 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 CCNB1IP1Q9NPC3 277 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 MAN2C1Q9NTJ4 1040 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 ZNF346Q9UL40 294 aaKnown RBP7.28□□□□□ -1.24
PSEN1-209ENST00000553855 CREBBPQ92793 2442 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 FBN2P35556 2912 aa7.28□□□□□ -1.24
PSEN1-209ENST00000553855 TRBV4-1A0A0J9YWV2 114 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 IQCMA0A1B0GVH7 501 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 DHRS12A0PJE2 317 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 SH3PXD2BA1X283 911 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 CIB2O75838 187 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 SEC14L2O76054 403 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 PLAUP00749 431 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 CST1P01037 141 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 SEMG1P04279 462 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 CD14P08571 375 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 PGA4P0DJD7 388 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 PGA3P0DJD8 388 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 B4GALT1P15291 398 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 NPR2P20594 1047 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 SLC6A6P31641 620 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 IDH3GP51553 393 aaPredicted RBP7.27□□□□□ -1.25
PSEN1-209ENST00000553855 RAB1AP62820 205 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 ERVK-25P63136 954 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 TUBA1BP68363 451 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 TUBA4AP68366 448 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 MYBPC1Q00872 1141 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 GALK2Q01415 458 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 BNIP1Q12981 228 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 GK3PQ14409 553 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 NKPD1Q17RQ9 610 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 C3orf36Q3SXR2 165 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 NRN1LQ496H8 165 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 GPR139Q6DWJ6 353 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 OR2T5Q6IEZ7 315 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 RPL13AP3Q6NVV1 102 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 ZNF544Q6NX49 715 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 DNM1P34Q6PK57 102 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 SMARCD3Q6STE5 483 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 CCDC121Q6ZUS5 278 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 TUBA1AQ71U36 451 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 LINGO2Q7L985 606 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 SLC22A24Q8N4F4 322 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 ARIH2OSQ8N7S6 290 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 OR4F15Q8NGB8 312 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 OR52L1Q8NGH7 329 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 OR2T29Q8NH02 315 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 FANK1Q8TC84 345 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 NSMAFQ92636 917 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 MCHR2Q969V1 340 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 CLPTM1LQ96KA5 538 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 KATNB1Q9BVA0 655 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 MMADHCQ9H3L0 296 aaPredicted RBP7.27□□□□□ -1.25
PSEN1-209ENST00000553855 C1orf198Q9H425 327 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 SMURF2Q9HAU4 748 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 AP5S1Q9NUS5 200 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 NPAP1Q9NZP6 1156 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 MOKQ9UQ07 419 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 LAMP3Q9UQV4 416 aa7.27□□□□□ -1.25
PSEN1-209ENST00000553855 SAMHD1Q9Y3Z3 626 aaKnown RBP7.27□□□□□ -1.25
PSEN1-209ENST00000553855 CELSR2Q9HCU4 2923 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 AHCYL1O43865 530 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 E2F6O75461 281 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 RENP00797 406 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 IGHMP01871 453 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 HLA-HP01893 362 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 TSPAN19P0C672 248 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 CD53P19397 219 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 GSTM3P21266 225 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 FPR3P25089 353 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 LOXP28300 417 aaPredicted RBP7.26□□□□□ -1.25
PSEN1-209ENST00000553855 APOBEC3AP31941 199 aaPredicted RBP7.26□□□□□ -1.25
PSEN1-209ENST00000553855 OMPP47874 163 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 PTDSS1P48651 473 aaKnown RBP7.26□□□□□ -1.25
PSEN1-209ENST00000553855 PCBD1P61457 104 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 NKX6-1P78426 367 aaPredicted RBP7.26□□□□□ -1.25
PSEN1-209ENST00000553855 MS4A2Q01362 244 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 HSF2Q03933 536 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 PIGFQ07326 219 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 KRR1Q13601 381 aaKnown RBP7.26□□□□□ -1.25
PSEN1-209ENST00000553855 SGCAQ16586 387 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms