RNA–Protein interactions for RNA: ENST00000553746.1

ATL1-204, Transcript of atlastin GTPase 1, humanhuman

TSL 2

Gene ATL1, Length 370 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-204ENST00000553746 IFT88Q13099 833 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 RAET1GQ6H3X3 334 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 RBM43Q6ZSC3 357 aaKnown RBP0.85□□□□□ -2.27
ATL1-204ENST00000553746 NT5DC3Q86UY8 548 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 VSTM4Q8IW00 320 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 PIANPQ8IYJ0 282 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 PRSS58Q8IYP2 241 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 OR2L3Q8NG85 312 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 SDR42E1Q8WUS8 393 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 MAIP1Q8WWC4 291 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 FAM3CQ92520 227 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 SGK3Q96BR1 496 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 EFHD2Q96C19 240 aaPredicted RBP0.85□□□□□ -2.27
ATL1-204ENST00000553746 FLYWCH2Q96CP2 140 aaKnown RBP0.85□□□□□ -2.27
ATL1-204ENST00000553746 TMEM117Q9H0C3 514 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 NHEJ1Q9H9Q4 299 aaPredicted RBP0.85□□□□□ -2.27
ATL1-204ENST00000553746 MCCC2Q9HCC0 563 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 CGNQ9P2M7 1197 aaKnown RBP0.85□□□□□ -2.27
ATL1-204ENST00000553746 CTSFQ9UBX1 484 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 ENOPH1Q9UHY7 261 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 ZNF639Q9UID6 485 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 RYR1P21817 5038 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 FRYQ5TBA9 3013 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 DNHD1Q96M86 4753 aa0.85□□□□□ -2.27
ATL1-204ENST00000553746 MXRA5Q9NR99 2828 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 WDR87Q6ZQQ6 2873 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 A0A0B4J2A0 478 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 CENPVL3A0A0U1RRI6 287 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 A8MUI8 341 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 FABP3P05413 133 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 RORAP35398 523 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 FUSP35637 526 aaKnown RBP eCLIP0.84□□□□□ -2.27
ATL1-204ENST00000553746 GGTA1PQ4G0N0 100 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 SLC35F2Q8IXU6 374 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 ACOT4Q8N9L9 421 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 SAMD8Q96LT4 415 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 RNF2Q99496 336 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 TMEM59Q9BXS4 323 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 THAP9Q9H5L6 903 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 FAM49BQ9NUQ9 324 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 SPASTQ9UBP0 616 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 SHPKQ9UHJ6 478 aa0.84□□□□□ -2.27
ATL1-204ENST00000553746 DCHS1Q96JQ0 3298 aa0.84□□□□□ -2.28
ATL1-204ENST00000553746 HIVEP3Q5T1R4 2406 aa0.84□□□□□ -2.28
ATL1-204ENST00000553746 TMEM120BA0PK00 339 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 A8MXQ7 604 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 SHOX2O60902 331 aaPredicted RBP0.83□□□□□ -2.28
ATL1-204ENST00000553746 AP2A1O95782 977 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 MBD3O95983 291 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 ZNF806P0C7X5 589 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 CCDC130P13994 396 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 TCN1P20061 433 aaPredicted RBP0.83□□□□□ -2.28
ATL1-204ENST00000553746 HTR2AP28223 471 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 CASP14P31944 242 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 AQP2P41181 271 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 SUB1P53999 127 aaKnown RBP eCLIP0.83□□□□□ -2.28
ATL1-204ENST00000553746 NUCB2P80303 420 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 TATDN3Q17R31 274 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 PLBD1Q6P4A8 553 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 TMEM179Q6ZVK1 233 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 USP50Q70EL3 339 aaPredicted RBP0.83□□□□□ -2.28
ATL1-204ENST00000553746 MSANTD4Q8NCY6 345 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 FBXL13Q8NEE6 735 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 UFD1Q92890 307 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 RIT2Q99578 217 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 SH3GL3Q99963 347 aa0.83□□□□□ -2.28
ATL1-204ENST00000553746 SAV1Q9H4B6 383 aaPredicted RBP0.83□□□□□ -2.28
ATL1-204ENST00000553746 FLG2Q5D862 2391 aaPredicted RBP0.83□□□□□ -2.28
ATL1-204ENST00000553746 USP34Q70CQ2 3546 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 CRB1P82279 1406 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 CSMD1Q96PZ7 3565 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 EP300Q09472 2414 aaPredicted RBP0.82□□□□□ -2.28
ATL1-204ENST00000553746 RNF103-CHMP3A0A140T963 221 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 MGRN1O60291 552 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 MFN2O95140 757 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 OXSR1O95747 527 aaPredicted RBP0.82□□□□□ -2.28
ATL1-204ENST00000553746 HSMCR30P0CW71 290 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 ETS1P14921 441 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 SLC2A5P22732 501 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 MMP11P24347 488 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 AK4P27144 223 aaPredicted RBP0.82□□□□□ -2.28
ATL1-204ENST00000553746 GCAP28676 217 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 CCND2P30279 289 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 CASP4P49662 377 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 UGT2B15P54855 530 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 PDK1Q15118 436 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 TPD52L1Q16890 204 aaPredicted RBP0.82□□□□□ -2.28
ATL1-204ENST00000553746 KRTAP20-1Q3LI63 56 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 TMEM31Q5JXX7 168 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 C1orf220Q5T0J3 134 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 RAB12Q6IQ22 244 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 ASCL5Q7RTU5 278 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 HDDC2Q7Z4H3 204 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 DEFB123Q8N688 67 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 SPRYD4Q8WW59 207 aaPredicted RBP0.82□□□□□ -2.28
ATL1-204ENST00000553746 TBL1YQ9BQ87 522 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 SPXQ9BT56 116 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 SLC25A2Q9BXI2 301 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 DPH5Q9H2P9 285 aa0.82□□□□□ -2.28
ATL1-204ENST00000553746 UVRAGQ9P2Y5 699 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms