RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 TAF11Q15544 211 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 C3orf36Q3SXR2 165 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 ZBED5Q49AG3 693 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 C11orf71Q6IPW1 123 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 SKA3Q8IX90 412 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 SLC22A24Q8N4F4 322 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 FAM169BQ8N8A8 192 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 FANK1Q8TC84 345 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 NANOS1Q8WY41 292 aaKnown RBP20.48■□□□□ 0.87
TDP1-205ENST00000553527 MS4A3Q96HJ5 214 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 SH3GL3Q99963 347 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 GRIP2Q9C0E4 1043 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 B3GNT2Q9NY97 397 aa20.48■□□□□ 0.87
TDP1-205ENST00000553527 ARFGEF3Q5TH69 2177 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 SSX4O60224 188 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 GIPRP48546 466 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 TSPAN31Q12999 210 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 TNK1Q13470 666 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 RAB35Q15286 201 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 ZNF627Q7L945 461 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 HS3ST5Q8IZT8 346 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 NOXO1Q8NFA2 376 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 OR5K1Q8NHB7 308 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 NRBF2Q96F24 287 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 CENPNQ96H22 339 aaPredicted RBP20.47■□□□□ 0.87
TDP1-205ENST00000553527 PKP2Q99959 881 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 SEMA6AQ9H2E6 1030 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 TXNIPQ9H3M7 391 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 CA10Q9NS85 328 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 TMEM38BQ9NVV0 291 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 ZNF224Q9NZL3 707 aa20.47■□□□□ 0.87
TDP1-205ENST00000553527 ZNF346Q9UL40 294 aaKnown RBP20.47■□□□□ 0.87
TDP1-205ENST00000553527 GASTP01350 101 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 OR8G3PP0DMU2 310 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 ZNF23P17027 643 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 ZNF84P51523 738 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 CD47Q08722 323 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 ARMC4Q5T2S8 1044 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 HDDC2Q7Z4H3 204 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 HIPK1Q86Z02 1210 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 FGFBP3Q8TAT2 258 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 HDAC2Q92769 488 aaKnown RBP20.46■□□□□ 0.87
TDP1-205ENST00000553527 FEVQ99581 238 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 DGCR6LQ9BY27 220 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 MRPL13Q9BYD1 178 aaKnown RBP20.46■□□□□ 0.87
TDP1-205ENST00000553527 RNF121Q9H920 327 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 KIF17Q9P2E2 1029 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 SIGLEC7Q9Y286 467 aa20.46■□□□□ 0.87
TDP1-205ENST00000553527 IGHV2OR16-5A0A0B4J2B6 119 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 UBL3O95164 117 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 NDUFB2O95178 105 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 FARS2O95363 451 aaKnown RBP20.45■□□□□ 0.86
TDP1-205ENST00000553527 SLC2A10O95528 541 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 RAB36O95755 333 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 GSTM3P21266 225 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 RPL4P36578 427 aaKnown RBP20.45■□□□□ 0.86
TDP1-205ENST00000553527 SERPINF1P36955 418 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 HGFACQ04756 655 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 FHL1Q13642 323 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 HIST3H3Q16695 136 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 BIVMQ86UB2 503 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 ZDHHC13Q8IUH4 622 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 LRRC18Q8N456 261 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 OR4F15Q8NGB8 312 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 NSMAFQ92636 917 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 PMF1-BGLAPU3KQ54 211 aa20.45■□□□□ 0.86
TDP1-205ENST00000553527 MTORP42345 2549 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 G3V2T6 193 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 OR4A8P0C604 315 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 BMP4P12644 408 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 THBS4P35443 961 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 NUDT6P53370 316 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 RPL27P61353 136 aaKnown RBP20.44■□□□□ 0.86
TDP1-205ENST00000553527 FMODQ06828 376 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 RAB39AQ14964 217 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 KRT80Q6KB66 452 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 SMARCD3Q6STE5 483 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 CLEC9AQ6UXN8 241 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 ZNF620Q6ZNG0 422 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 SVOPLQ8N434 492 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 CLDN22Q8N7P3 220 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 ATG16L2Q8NAA4 619 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 ICA1LQ8NDH6 482 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 IL17RDQ8NFM7 739 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 ZNF556Q9HAH1 456 aa20.44■□□□□ 0.86
TDP1-205ENST00000553527 STX18Q9P2W9 335 aaKnown RBP20.44■□□□□ 0.86
TDP1-205ENST00000553527 SAC3D1A6NKF1 404 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 PTP4A3O75365 173 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 BAG2O95816 211 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 ANXA8P13928 327 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 ZNF14P17017 642 aaPredicted RBP20.43■□□□□ 0.86
TDP1-205ENST00000553527 PRKACGP22612 351 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 CDAP32320 146 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 ERVK-25P63136 954 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 ETFDHQ16134 617 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 MST1LQ2TV78 715 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 PQLC1Q8N2U9 271 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 LRRC75AQ8NAA5 344 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 MAPK1IP1LQ8NDC0 245 aa20.43■□□□□ 0.86
TDP1-205ENST00000553527 COX4I2Q96KJ9 171 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms