RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 C10orf128Q5T292 105 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 ALDH16A1Q8IZ83 802 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 OR2T12Q8NG77 320 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 FNDC8Q8TC99 324 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 LIPHQ8WWY8 451 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 C1orf159Q96HA4 380 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 ZNF583Q96ND8 569 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 RBP7Q96R05 134 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 SEPHS2Q99611 448 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 C19orf24Q9BVV8 132 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 NARFLQ9H6Q4 476 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 C20orf141Q9NUB4 165 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 DECR2Q9NUI1 292 aa10.93□□□□□ -0.66
LINC00643-202ENST00000553426 MYEF2Q9P2K5 600 aaKnown RBP10.93□□□□□ -0.66
LINC00643-202ENST00000553426 ELOVL7A1L3X0 281 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 NPIPB13A6NJU9 1138 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 C17orf100A8MU93 164 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 FAM220BPB1ANY3 271 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 NPIPB4C9JG80 1138 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 FXYD1O00168 92 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 TCF21O43680 179 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 ANPEPP15144 967 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 ZNF250P15622 560 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 STOMP27105 288 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 GCH1P30793 250 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 KDELR2P33947 212 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 SELENOWP63302 87 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 MRPS34P82930 218 aaKnown RBP10.92□□□□□ -0.66
LINC00643-202ENST00000553426 SGCAQ16586 387 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 PABPC1L2AQ5JQF8 200 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 THEM4Q5T1C6 240 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 RINLQ6ZS11 566 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 C1orf174Q8IYL3 243 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 PAQR4Q8N4S7 273 aaPredicted RBP10.92□□□□□ -0.66
LINC00643-202ENST00000553426 TEX29Q8N6K0 151 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 MOSPD2Q8NHP6 518 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 NSMAFQ92636 917 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 PRRC1Q96M27 445 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 ALG12Q9BV10 488 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 TXNIPQ9H3M7 391 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 SAR1AQ9NR31 198 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 ZNF275Q9NSD4 429 aaPredicted RBP10.92□□□□□ -0.66
LINC00643-202ENST00000553426 FGFR1OP2Q9NVK5 253 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 METRNQ9UJH8 293 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 GRIP1Q9Y3R0 1128 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 CAPN7Q9Y6W3 813 aa10.92□□□□□ -0.66
LINC00643-202ENST00000553426 IGLV3-9A0A075B6K5 115 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 PLSCR5A0PG75 271 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 SLC22A2O15244 555 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 CDC14BO60729 498 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 NCR1O76036 304 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 SLC2A10O95528 541 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 CLPTM1O96005 669 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 IFNW1P05000 195 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 IFI30P13284 250 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 MAGEB1P43366 347 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 GDI2P50395 445 aaKnown RBP10.91□□□□□ -0.66
LINC00643-202ENST00000553426 ZNF133P52736 654 aaPredicted RBP10.91□□□□□ -0.66
LINC00643-202ENST00000553426 PCBD1P61457 104 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 CCL8P80075 99 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 TOP3AQ13472 1001 aaPredicted RBP10.91□□□□□ -0.66
LINC00643-202ENST00000553426 LAPTM4AQ15012 233 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 ANKDD1AQ495B1 522 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 ARMC4Q5T2S8 1044 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 FAM205BPQ63HN1 556 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 SHQ1Q6PI26 577 aaKnown RBP10.91□□□□□ -0.66
LINC00643-202ENST00000553426 ARPINQ7Z6K5 226 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 MICU2Q8IYU8 434 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 OR1J1Q8NGS3 322 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 OR51F2Q8NH61 342 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 CLDND2Q8NHS1 167 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 YIPF5Q969M3 257 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 TMEM186Q96B77 213 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 BPIFA2Q96DR5 249 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 FNDC11Q9BVV2 318 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 HIF1ANQ9NWT6 349 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 NKIRAS2Q9NYR9 191 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 HIF3AQ9Y2N7 669 aa10.91□□□□□ -0.66
LINC00643-202ENST00000553426 C5orf49A4QMS7 147 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 A6NIZ1 184 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 HAX1O00165 279 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 GSTA4O15217 222 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 IGHV3-13P01766 116 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 MSMBP08118 114 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 MMP7P09237 267 aaPredicted RBP10.9□□□□□ -0.66
LINC00643-202ENST00000553426 TSPAN19P0C672 248 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 ZNF32P17041 273 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 CDAP32320 146 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 RAP1BP61224 184 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 RPL27P61353 136 aaKnown RBP10.9□□□□□ -0.66
LINC00643-202ENST00000553426 ERVS71-1P61550 626 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 RAP1AP62834 184 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 SF3A3Q12874 501 aaKnown RBP eCLIP10.9□□□□□ -0.66
LINC00643-202ENST00000553426 HFEQ30201 348 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 ZNF718Q3SXZ3 478 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 FAM209AQ5JX71 171 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 FAM27BQ5VT28 67 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 ARL9Q6T311 187 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 RRM2BQ7LG56 351 aa10.9□□□□□ -0.66
LINC00643-202ENST00000553426 CPEB3Q8NE35 698 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms