RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 PSMB1P20618 241 aaKnown RBP11.84□□□□□ -0.51
ERBB3-215ENST00000550828 CD79BP40259 229 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 GABRA6Q16445 453 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 SFRP5Q5T4F7 317 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 LAIR2Q6ISS4 152 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 B3GLCTQ6Y288 498 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 C22orf34Q6ZV56 151 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 CXXC5Q7LFL8 322 aaKnown RBP11.84□□□□□ -0.51
ERBB3-215ENST00000550828 OR1K1Q8NGR3 316 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 CA5BP1Q8WTZ4 195 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 APH1BQ8WW43 257 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 BCL2L2Q92843 193 aaPredicted RBP11.84□□□□□ -0.51
ERBB3-215ENST00000550828 KISS1RQ969F8 398 aaPredicted RBP11.84□□□□□ -0.51
ERBB3-215ENST00000550828 SLC38A2Q96QD8 506 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 VCXQ9H320 206 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 RERGLQ9H628 205 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 SRA1Q9HD15 236 aaKnown RBP11.84□□□□□ -0.51
ERBB3-215ENST00000550828 TMEM38BQ9NVV0 291 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 TAS2R16Q9NYV7 291 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 ZNF224Q9NZL3 707 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 DNAJC27Q9NZQ0 273 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 COA3Q9Y2R0 106 aaPredicted RBP11.84□□□□□ -0.51
ERBB3-215ENST00000550828 FKBP7Q9Y680 259 aa11.84□□□□□ -0.51
ERBB3-215ENST00000550828 ANKHD1Q8IWZ3 2542 aaKnown RBP11.84□□□□□ -0.51
ERBB3-215ENST00000550828 UTP20O75691 2785 aaKnown RBP11.84□□□□□ -0.51
ERBB3-215ENST00000550828 ZNF99A8MXY4 864 aaPredicted RBP11.83□□□□□ -0.52
ERBB3-215ENST00000550828 H0YAE9 185 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 TLX2O43763 284 aaPredicted RBP11.83□□□□□ -0.52
ERBB3-215ENST00000550828 KHDRBS3O75525 346 aaKnown RBP11.83□□□□□ -0.52
ERBB3-215ENST00000550828 RAD51DO75771 328 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 KRT33AO76009 404 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 B4GALT1P15291 398 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 RIPPLY3P57055 190 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 SNTB1Q13884 538 aaKnown RBP11.83□□□□□ -0.52
ERBB3-215ENST00000550828 STK11Q15831 433 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 HIKESHIQ53FT3 197 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 KLHL24Q6TFL4 600 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 UGT2A3Q6UWM9 527 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 ZNF627Q7L945 461 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 WDR31Q8NA23 367 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 SLC26A10Q8NG04 563 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 FGFBP3Q8TAT2 258 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 RNASE6Q93091 150 aaKnown RBP11.83□□□□□ -0.52
ERBB3-215ENST00000550828 MUS81Q96NY9 551 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 RBP7Q96R05 134 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 FOXB1Q99853 325 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 RACGAP1Q9H0H5 632 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 VCX3BQ9H321 246 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 NOX3Q9HBY0 568 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 KCNJ16Q9NPI9 418 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 B3GAT2Q9NPZ5 323 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 MRPL22Q9NWU5 206 aaKnown RBP11.83□□□□□ -0.52
ERBB3-215ENST00000550828 PCDHGB5Q9Y5G0 923 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 PKDREJQ9NTG1 2253 aa11.83□□□□□ -0.52
ERBB3-215ENST00000550828 A0A096LPE4 126 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 A0A1W2PPL8 197 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 A0A1W2PPZ6 126 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 PRR23D1E9PI22 279 aaPredicted RBP11.82□□□□□ -0.52
ERBB3-215ENST00000550828 WBP4O75554 376 aaKnown RBP11.82□□□□□ -0.52
ERBB3-215ENST00000550828 TFP02787 698 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 PRR23D2P0DMB1 279 aaPredicted RBP11.82□□□□□ -0.52
ERBB3-215ENST00000550828 UGT2B10P36537 528 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 CDC42P60953 191 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 ISL1P61371 349 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 SNRPGP62308 76 aaKnown RBP11.82□□□□□ -0.52
ERBB3-215ENST00000550828 ENDOGQ14249 297 aaKnown RBP11.82□□□□□ -0.52
ERBB3-215ENST00000550828 P2RY6Q15077 328 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 MEP1BQ16820 701 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 TTC23Q5W5X9 447 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 SEZ6L2Q6UXD5 910 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 BHLHA15Q7RTS1 189 aaPredicted RBP11.82□□□□□ -0.52
ERBB3-215ENST00000550828 ZNF511Q8NB15 262 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 ZNF555Q8NEP9 628 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 OR8J1Q8NGP2 316 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 OR2T4Q8NH00 348 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 RHOXF1Q8NHV9 184 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 FNDC8Q8TC99 324 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 FBLIM1Q8WUP2 373 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 OTULINQ96BN8 352 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 BOD1Q96IK1 185 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 PLEKHA8Q96JA3 519 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 ZNF582Q96NG8 517 aaPredicted RBP11.82□□□□□ -0.52
ERBB3-215ENST00000550828 OR51V1Q9H2C8 321 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 RASSF4Q9H2L5 321 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 EMC7Q9NPA0 242 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 POLE4Q9NR33 117 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 RASSF1Q9NS23 344 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 IMPAD1Q9NX62 359 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 ELOVL5Q9NYP7 299 aa11.82□□□□□ -0.52
ERBB3-215ENST00000550828 ANKRD17O75179 2603 aaKnown RBP11.81□□□□□ -0.52
ERBB3-215ENST00000550828 A0A1W2PR80 420 aa11.81□□□□□ -0.52
ERBB3-215ENST00000550828 TVP23AA6NH52 213 aa11.81□□□□□ -0.52
ERBB3-215ENST00000550828 ENTPD6O75354 484 aa11.81□□□□□ -0.52
ERBB3-215ENST00000550828 THBDP07204 575 aa11.81□□□□□ -0.52
ERBB3-215ENST00000550828 CRABP1P29762 137 aa11.81□□□□□ -0.52
ERBB3-215ENST00000550828 SH3BGRP55822 239 aaPredicted RBP11.81□□□□□ -0.52
ERBB3-215ENST00000550828 TUBA1BP68363 451 aa11.81□□□□□ -0.52
ERBB3-215ENST00000550828 TUBA4AP68366 448 aa11.81□□□□□ -0.52
ERBB3-215ENST00000550828 MRPS34P82930 218 aaKnown RBP11.81□□□□□ -0.52
ERBB3-215ENST00000550828 APOFQ13790 326 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms