RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 LCKP06239 509 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 MMP7P09237 267 aaPredicted RBP14.01□□□□□ -0.17
VPS29-207ENST00000549970 TACSTD2P09758 323 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 CCNOP22674 350 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 APEX1P27695 318 aaKnown RBP14.01□□□□□ -0.17
VPS29-207ENST00000549970 GSK3BP49841 420 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 NUDT2P50583 147 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 CTXN1P60606 82 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 RPL27P61353 136 aaKnown RBP14.01□□□□□ -0.17
VPS29-207ENST00000549970 ERVS71-1P61550 626 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 MRPS34P82930 218 aaKnown RBP14.01□□□□□ -0.17
VPS29-207ENST00000549970 TRAM2Q15035 370 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 SGCAQ16586 387 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 NKPD1Q17RQ9 610 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 IFI44LQ53G44 452 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 ELFN2Q5R3F8 820 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 FKBP9P1Q75LS8 142 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 CBLL1Q75N03 491 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 CLDN22Q8N7P3 220 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 OR1J2Q8NGS2 313 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 OR51A7Q8NH64 312 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 NMD3Q96D46 503 aaKnown RBP14.01□□□□□ -0.17
VPS29-207ENST00000549970 HSH2DQ96JZ2 352 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 HOPXQ9BPY8 73 aaPredicted RBP14.01□□□□□ -0.17
VPS29-207ENST00000549970 LRMDAQ9H2I8 198 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 KCNN2Q9H2S1 579 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 EFCAB1Q9HAE3 211 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 SIAEQ9HAT2 523 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 CCNB1IP1Q9NPC3 277 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 TAAR3PQ9P1P4 343 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 ZNF346Q9UL40 294 aaKnown RBP14.01□□□□□ -0.17
VPS29-207ENST00000549970 UGT2A1Q9Y4X1 527 aa14.01□□□□□ -0.17
VPS29-207ENST00000549970 MXRA5Q9NR99 2828 aa14□□□□□ -0.17
VPS29-207ENST00000549970 HTR3EA5X5Y0 456 aa14□□□□□ -0.17
VPS29-207ENST00000549970 FFAR1O14842 300 aa14□□□□□ -0.17
VPS29-207ENST00000549970 SNAP29O95721 258 aa14□□□□□ -0.17
VPS29-207ENST00000549970 SERPINA1P01009 418 aa14□□□□□ -0.17
VPS29-207ENST00000549970 IGHMP01871 453 aa14□□□□□ -0.17
VPS29-207ENST00000549970 NR2C1P13056 603 aa14□□□□□ -0.17
VPS29-207ENST00000549970 ZNF32P17041 273 aa14□□□□□ -0.17
VPS29-207ENST00000549970 APLNRP35414 380 aa14□□□□□ -0.17
VPS29-207ENST00000549970 SELENOVP59797 346 aa14□□□□□ -0.17
VPS29-207ENST00000549970 CCNIQ14094 377 aa14□□□□□ -0.17
VPS29-207ENST00000549970 TAF11Q15544 211 aa14□□□□□ -0.17
VPS29-207ENST00000549970 PABPC1L2AQ5JQF8 200 aa14□□□□□ -0.17
VPS29-207ENST00000549970 FAM120AOSQ5T036 256 aa14□□□□□ -0.17
VPS29-207ENST00000549970 C8orf82Q6P1X6 216 aaPredicted RBP14□□□□□ -0.17
VPS29-207ENST00000549970 SLC25A47Q6Q0C1 308 aa14□□□□□ -0.17
VPS29-207ENST00000549970 ZNF730Q6ZMV8 503 aa14□□□□□ -0.17
VPS29-207ENST00000549970 OAFQ86UD1 273 aa14□□□□□ -0.17
VPS29-207ENST00000549970 SPATA3Q8NHX4 192 aa14□□□□□ -0.17
VPS29-207ENST00000549970 FAM162AQ96A26 154 aa14□□□□□ -0.17
VPS29-207ENST00000549970 NABP1Q96AH0 204 aa14□□□□□ -0.17
VPS29-207ENST00000549970 TSPAN32Q96QS1 320 aa14□□□□□ -0.17
VPS29-207ENST00000549970 ALG12Q9BV10 488 aa14□□□□□ -0.17
VPS29-207ENST00000549970 SMURF2Q9HAU4 748 aa14□□□□□ -0.17
VPS29-207ENST00000549970 EFCAB9A8MZ26 197 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 MGRN1O60291 552 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 NCR1O76036 304 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 NCK1P16333 377 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 SRD5A1P18405 259 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 COL8A2P25067 703 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 RAD52P43351 418 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 UCP2P55851 309 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 KLF3P57682 345 aaPredicted RBP13.99□□□□□ -0.17
VPS29-207ENST00000549970 ERVK-25P63136 954 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 PRKCDQ05655 676 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 TBPL2Q6SJ96 375 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 LRRC75AQ8NAA5 344 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 CPEB3Q8NE35 698 aaKnown RBP13.99□□□□□ -0.17
VPS29-207ENST00000549970 OR13C2Q8NGS9 318 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 AKR7LQ8NHP1 331 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 ZNF519Q8TB69 540 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 SYNPRQ8TBG9 265 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 ACOT11Q8WXI4 607 aaPredicted RBP13.99□□□□□ -0.17
VPS29-207ENST00000549970 C11orf40Q8WZ69 217 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 HPS1Q92902 700 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 RBP7Q96R05 134 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 KCTD14Q9BQ13 255 aaPredicted RBP13.99□□□□□ -0.17
VPS29-207ENST00000549970 BCL2L14Q9BZR8 327 aa13.99□□□□□ -0.17
VPS29-207ENST00000549970 IGLV3-9A0A075B6K5 115 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 A0A087WUU8 490 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 GMNCA6NCL1 334 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 PHF1O43189 567 aaPredicted RBP13.98□□□□□ -0.17
VPS29-207ENST00000549970 PRSS23O95084 383 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 ZNF250P15622 560 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 HNF1AP20823 631 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 ACHEP22303 614 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 STOMP27105 288 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 MAGEB1P43366 347 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 GPR4P46093 362 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 GPR6P46095 362 aaPredicted RBP13.98□□□□□ -0.17
VPS29-207ENST00000549970 SLC9A3P48764 834 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 CR1LQ2VPA4 569 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 THEM4Q5T1C6 240 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 HACD2Q6Y1H2 254 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 MBOAT2Q6ZWT7 520 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 OR1J1Q8NGS3 322 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 SNX33Q8WV41 574 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 RDH5Q92781 318 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms