RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 C8orf31Q8N9H6 132 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 SUMF2Q8NBJ7 301 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 OR9G4Q8NGQ1 327 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 LYPD6BQ8NI32 183 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 CAPSLQ8WWF8 208 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 IMMP1LQ96LU5 166 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 OSBPL10Q9BXB5 764 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 CYP3A43Q9HB55 503 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 DAZ3Q9NR90 486 aaKnown RBP2.88□□□□□ -1.95
SNRPF-202ENST00000549580 MMP26Q9NRE1 261 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 CCDC59Q9P031 241 aaKnown RBP2.88□□□□□ -1.95
SNRPF-202ENST00000549580 SHPKQ9UHJ6 478 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 GOLT1BQ9Y3E0 138 aa2.88□□□□□ -1.95
SNRPF-202ENST00000549580 COL22A1Q8NFW1 1626 aaPredicted RBP2.88□□□□□ -1.95
SNRPF-202ENST00000549580 ZNF816-ZNF321PA0A0X1KG74 233 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 PEX7O00628 323 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 HAT1O14929 419 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 SCAMP2O15127 329 aaKnown RBP2.87□□□□□ -1.95
SNRPF-202ENST00000549580 CLDN11O75508 207 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 TNFSF13O75888 250 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 MOSP00540 346 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 IGLV1-47P01700 117 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 SERPINE2P07093 398 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 TPM1P09493 284 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 CRISP2P16562 243 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 TUBG1P23258 451 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 CASQ1P31415 396 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 BCAP31P51572 246 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 CLDN18P56856 261 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 CARD18P57730 90 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 RPS21P63220 83 aaKnown RBP2.87□□□□□ -1.95
SNRPF-202ENST00000549580 NDPQ00604 133 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 SLC25A11Q02978 314 aaKnown RBP2.87□□□□□ -1.95
SNRPF-202ENST00000549580 CLINT1Q14677 625 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 SPESP1Q6UW49 350 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 HDDC2Q7Z4H3 204 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 TTC29Q8NA56 475 aaPredicted RBP2.87□□□□□ -1.95
SNRPF-202ENST00000549580 OR2L5Q8NG80 312 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 OR52E5Q8NH55 327 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 MYDGFQ969H8 173 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 ZNF707Q96C28 371 aaPredicted RBP2.87□□□□□ -1.95
SNRPF-202ENST00000549580 AURKBQ96GD4 344 aaPredicted RBP2.87□□□□□ -1.95
SNRPF-202ENST00000549580 ACTR3CQ9C0K3 210 aaPredicted RBP2.87□□□□□ -1.95
SNRPF-202ENST00000549580 IL22Q9GZX6 179 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 TDRD3Q9H7E2 651 aaKnown RBP2.87□□□□□ -1.95
SNRPF-202ENST00000549580 PXMP2Q9NR77 195 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 TUBG2Q9NRH3 451 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 CEMIPQ8WUJ3 1361 aa2.87□□□□□ -1.95
SNRPF-202ENST00000549580 GJE1A6NN92 205 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 F6UB75 175 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 H0YHG0 523 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 CHMP2AO43633 222 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 TRAF3IP2O43734 574 aaPredicted RBP2.86□□□□□ -1.95
SNRPF-202ENST00000549580 SPOPO43791 374 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 CCNB2O95067 398 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 UTS2O95399 124 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 CD160O95971 181 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 S100A9P06702 114 aaKnown RBP2.86□□□□□ -1.95
SNRPF-202ENST00000549580 ACSM4P0C7M7 580 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 SMIM10L1P0DMW3 83 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 CTRB1P17538 263 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 SRMP19623 302 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 GPX4P36969 197 aaPredicted RBP2.86□□□□□ -1.95
SNRPF-202ENST00000549580 NUP62P37198 522 aaPredicted RBP2.86□□□□□ -1.95
SNRPF-202ENST00000549580 TNFSF9P41273 254 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 ETV1P50549 477 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 DAOAP59103 153 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 REG3AQ06141 175 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 TRAM2Q15035 370 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 OR52W1Q6IF63 320 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 H2AFVQ71UI9 128 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 CMC1Q7Z7K0 106 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 APRG1Q8IVJ8 170 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 JAGN1Q8N5M9 183 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 DCAF4L2Q8NA75 395 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 OR5B3Q8NH48 314 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 MCOLN3Q8TDD5 553 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 SMIM10Q96HG1 83 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 JSRP1Q96MG2 331 aaPredicted RBP2.86□□□□□ -1.95
SNRPF-202ENST00000549580 OPALINQ96PE5 141 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 P2RX4Q99571 388 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 UCK2Q9BZX2 261 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 ZYG11BQ9C0D3 744 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 NXF3Q9H4D5 531 aaKnown RBP2.86□□□□□ -1.95
SNRPF-202ENST00000549580 RPF2Q9H7B2 306 aaKnown RBP2.86□□□□□ -1.95
SNRPF-202ENST00000549580 C8orf33Q9H7E9 229 aaPredicted RBP2.86□□□□□ -1.95
SNRPF-202ENST00000549580 LZTFL1Q9NQ48 299 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 CTPS2Q9NRF8 586 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 F11RQ9Y624 299 aaKnown RBP2.86□□□□□ -1.95
SNRPF-202ENST00000549580 MROH7-TTC4A0A0A0MT08 1334 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 TNIKQ9UKE5 1360 aa2.86□□□□□ -1.95
SNRPF-202ENST00000549580 WDR62O43379 1518 aa2.85□□□□□ -1.95
SNRPF-202ENST00000549580 GABRR3A8MPY1 467 aa2.85□□□□□ -1.95
SNRPF-202ENST00000549580 LYRM9A8MSI8 78 aa2.85□□□□□ -1.95
SNRPF-202ENST00000549580 H3BNH8 94 aa2.85□□□□□ -1.95
SNRPF-202ENST00000549580 ZNF701M0R085 212 aaPredicted RBP2.85□□□□□ -1.95
SNRPF-202ENST00000549580 M0R3G1 203 aa2.85□□□□□ -1.95
SNRPF-202ENST00000549580 AIREO43918 545 aa2.85□□□□□ -1.95
SNRPF-202ENST00000549580 DPM1O60762 260 aa2.85□□□□□ -1.95
SNRPF-202ENST00000549580 SRP72O76094 671 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms