RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 H7C417 338 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 GCM2O75603 506 aaPredicted RBP14.81□□□□□ -0.04
CUX1-213ENST00000549414 GLULP15104 373 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 FOLR1P15328 257 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 PVALBP20472 110 aaPredicted RBP14.81□□□□□ -0.04
CUX1-213ENST00000549414 HTR5AP47898 357 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 COL13A1Q5TAT6 717 aaPredicted RBP14.81□□□□□ -0.04
CUX1-213ENST00000549414 AAED1Q7RTV5 226 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 ESX1Q8N693 406 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 ZSCAN4Q8NAM6 433 aaPredicted RBP14.81□□□□□ -0.04
CUX1-213ENST00000549414 TMEM52Q8NDY8 209 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 MNTQ99583 582 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 LAT2Q9GZY6 243 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 COLQQ9Y215 455 aaPredicted RBP14.81□□□□□ -0.04
CUX1-213ENST00000549414 R4GN57 208 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 SDK2Q58EX2 2172 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 LILRA5A6NI73 299 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 TEX46H3BTG2 121 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 GPANK1O95872 356 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 HSF1Q00613 529 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 ASAH1Q13510 395 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 PRR18Q8N4B5 295 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 PSD2Q9BQI7 771 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 TMEM43Q9BTV4 400 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 PDCD11Q14690 1871 aaKnown RBP14.81□□□□□ -0.04
CUX1-213ENST00000549414 A0A087WUJ7 227 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 IGHV1OR15-9A0A0B4J2B8 117 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 PRICKLE3O43900 615 aaPredicted RBP14.81□□□□□ -0.04
CUX1-213ENST00000549414 TMPRSS11FQ6ZWK6 438 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 MRPL21Q7Z2W9 205 aaKnown RBP14.81□□□□□ -0.04
CUX1-213ENST00000549414 ZBTB8AQ96BR9 441 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 C3orf49Q96BT1 292 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 ZNF845Q96IR2 970 aaPredicted RBP14.81□□□□□ -0.04
CUX1-213ENST00000549414 WFDC6Q9BQY6 131 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 DNAJB12Q9NXW2 375 aaKnown RBP14.81□□□□□ -0.04
CUX1-213ENST00000549414 ASH2LQ9UBL3 628 aa14.81□□□□□ -0.04
CUX1-213ENST00000549414 SSX4O60224 188 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 CCDC190Q86UF4 302 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 COMMD7Q86VX2 200 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 UBALD2Q8IYN6 164 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 IFI44Q8TCB0 444 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 TAS2R4Q9NYW5 299 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 KCND3Q9UK17 655 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 MBTPS2O43462 519 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 HTR2AP28223 471 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 MSX1P28360 303 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 AGTR1P30556 359 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 C5orf46Q6UWT4 87 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 Q6ZTK2 550 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 SLC16A14Q7RTX9 510 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 GPR155Q7Z3F1 870 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 PXKQ7Z7A4 578 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 YRDCQ86U90 279 aaKnown RBP14.8□□□□□ -0.04
CUX1-213ENST00000549414 ZNF454Q8N9F8 522 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 OR1L3Q8NH93 324 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 WWTR1Q9GZV5 400 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 KCNN3Q9UGI6 736 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 FBXL2Q9UKC9 423 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 NUP50Q9UKX7 468 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 UBE2J1Q9Y385 318 aaPredicted RBP14.8□□□□□ -0.04
CUX1-213ENST00000549414 ABCA7Q8IZY2 2146 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 E9PI62 339 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 SLC33A1O00400 549 aaPredicted RBP14.8□□□□□ -0.04
CUX1-213ENST00000549414 EPHA4P54764 986 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 GABREP78334 506 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 SORDQ00796 357 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 SLC9A3R2Q15599 337 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 FXNQ16595 210 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 RAB11FIP2Q7L804 512 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 MVB12AQ96EY5 273 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 NEURL2Q9BR09 285 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 FKRPQ9H9S5 495 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 STEAP1Q9UHE8 339 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 LOC107986453A0A1B0GWG9 222 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 FCGR2AP12318 317 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 CDK2P24941 298 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 SLC35A1P78382 337 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 FAM199XQ6PEV8 388 aaPredicted RBP14.8□□□□□ -0.04
CUX1-213ENST00000549414 MORN4Q8NDC4 146 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 PIGTQ969N2 578 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 AUNIPQ9H7T9 357 aa14.8□□□□□ -0.04
CUX1-213ENST00000549414 COL6A6A6NMZ7 2263 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 TMEM82A0PJX8 343 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 EPOPA6NHQ4 379 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 PTHLHP12272 177 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 ANXA7P20073 488 aaKnown RBP14.79□□□□□ -0.04
CUX1-213ENST00000549414 RNF4P78317 190 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 RBMS2Q15434 407 aaKnown RBP14.79□□□□□ -0.04
CUX1-213ENST00000549414 BEND4Q6ZU67 534 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 KANSL1Q7Z3B3 1105 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 CMTM4Q8IZR5 234 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 BATF2Q8N1L9 274 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 DCUN1D4Q92564 292 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 TMEM59Q9BXS4 323 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 ISYNA1Q9NPH2 558 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 FSCN3Q9NQT6 498 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 HOXB5P09067 269 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 THBS2P35442 1172 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 FAPQ12884 760 aa14.79□□□□□ -0.04
CUX1-213ENST00000549414 LIX1LQ8IVB5 337 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms