RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 FBXW4P57775 412 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 SEC61GP60059 68 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 NUTF2P61970 127 aaKnown RBP1.6□□□□□ -2.15
CCDC38-206ENST00000548771 ARG2P78540 354 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 SYCNQ0VAF6 134 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 TAF7Q15545 349 aaPredicted RBP1.6□□□□□ -2.15
CCDC38-206ENST00000548771 POU2AF1Q16633 256 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 ZSCAN26Q16670 478 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 RABL6Q3YEC7 729 aaPredicted RBP1.6□□□□□ -2.15
CCDC38-206ENST00000548771 TMEM135Q86UB9 458 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 PSTKQ8IV42 348 aaKnown RBP1.6□□□□□ -2.15
CCDC38-206ENST00000548771 LGI3Q8N145 548 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 LRRC75A-AS1Q8N1F1 130 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 TEX9Q8N6V9 391 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 OR52M1Q8NGK5 317 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 OR4S2Q8NH73 311 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 TMEM54Q969K7 222 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 ZNF382Q96SR6 550 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 SH3GL1Q99961 368 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 SGK2Q9HBY8 427 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 HMG20AQ9NP66 347 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 GPATCH2LQ9NWQ4 482 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 ATP6V0A2Q9Y487 856 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 PEX16Q9Y5Y5 336 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 MRPS18BQ9Y676 258 aaKnown RBP1.6□□□□□ -2.15
CCDC38-206ENST00000548771 MUC6Q6W4X9 2439 aa1.6□□□□□ -2.15
CCDC38-206ENST00000548771 ZSWIM8A7E2V4 1837 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 TRAV39A0A0B4J263 110 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 TMEM223A0PJW6 202 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 C17orf51A8MQB3 221 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 GPR89AB7ZAQ6 455 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 F6UB75 175 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 UTS2O95399 124 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 C1orf105O95561 183 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 RAB3DO95716 219 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 GNAO1P09471 354 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 GPR89BP0CG08 455 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 HRH1P35367 487 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 VHLP40337 213 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 CDKN2BP42772 138 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 RFX3P48380 749 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 CSNK1A1P48729 337 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 CX3CR1P49238 355 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 GBX2P52951 348 aaPredicted RBP1.59□□□□□ -2.15
CCDC38-206ENST00000548771 ESRRGP62508 458 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 IRX3P78415 501 aaPredicted RBP1.59□□□□□ -2.15
CCDC38-206ENST00000548771 IL24Q13007 206 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 MAB21L1Q13394 359 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 CLINT1Q14677 625 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 ZNF77Q15935 545 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 FAM78AQ5JUQ0 283 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 PHYHD1Q5SRE7 291 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 ZNF684Q5T5D7 378 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 H2BFWTQ7Z2G1 175 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 EFL1Q7Z2Z2 1120 aaKnown RBP1.59□□□□□ -2.15
CCDC38-206ENST00000548771 PRSS58Q8IYP2 241 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 OR1L6Q8NGR2 347 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 RGP1Q92546 391 aaPredicted RBP1.59□□□□□ -2.15
CCDC38-206ENST00000548771 CREB3L1Q96BA8 519 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 TRIM44Q96DX7 344 aaPredicted RBP1.59□□□□□ -2.15
CCDC38-206ENST00000548771 SLC41A3Q96GZ6 507 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 SLC25A2Q9BXI2 301 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 PARP12Q9H0J9 701 aaKnown RBP1.59□□□□□ -2.15
CCDC38-206ENST00000548771 C12orf10Q9HB07 376 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 UVRAGQ9P2Y5 699 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 NPTNQ9Y639 398 aa1.59□□□□□ -2.15
CCDC38-206ENST00000548771 SDK2Q58EX2 2172 aa1.59□□□□□ -2.16
CCDC38-206ENST00000548771 NID2Q14112 1375 aa1.59□□□□□ -2.16
CCDC38-206ENST00000548771 ATP10AO60312 1499 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 WDR62O43379 1518 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 SGK1O00141 431 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 MPZL1O95297 269 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 AIFM1O95831 613 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 IL1BP01584 269 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 BCHEP06276 602 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 OR56A5P0C7T3 313 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 ETS2P15036 469 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 COL8A2P25067 703 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 MAS1LP35410 378 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 CEACAM6P40199 344 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 CDH4P55283 916 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 ECH1Q13011 328 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 GPM6BQ13491 265 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 PTPN20Q4JDL3 420 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 GALNT17Q6IS24 598 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 CCDC73Q6ZRK6 1079 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 HDDC2Q7Z4H3 204 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 OSR2Q8N2R0 312 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 EID2Q8N6I1 236 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 BHLHE23Q8NDY6 225 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 SDR9C7Q8NEX9 313 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 LKAAEAR1Q8TD35 194 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 CXorf40AQ8TE69 158 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 ABHD3Q8WU67 409 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 L3HYPDHQ96EM0 354 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 PIK3IP1Q96FE7 263 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 C12orf42Q96LP6 360 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 RNF157Q96PX1 679 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 TCHPQ9BT92 498 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 GON7Q9BXV9 100 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms