RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 LCKP06239 509 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 MSMBP08118 114 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 TROVE2P10155 538 aaKnown RBP eCLIP14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 UCP2P55851 309 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 TMEM33P57088 247 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 HSF2Q03933 536 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 PLP2Q04941 152 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 MAPRE2Q15555 327 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 PABPC1L2AQ5JQF8 200 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 CPEB3Q8NE35 698 aaKnown RBP14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 OR1J2Q8NGS2 313 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 SNX33Q8WV41 574 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 GTF3AQ92664 365 aaKnown RBP14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 PRRC1Q96M27 445 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 BCL2L14Q9BZR8 327 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 SIAEQ9HAT2 523 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 LPAR2Q9HBW0 351 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 TREM2Q9NZC2 230 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 A4GNTQ9UNA3 340 aa14.85□□□□□ -0.03
CHMP1A-205ENST00000548650 PPIHO43447 177 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 TCF21O43680 179 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 IFNA14P01570 189 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 IGHMP01871 453 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 GAAP10253 952 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 ZNF32P17041 273 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 FUT4P22083 530 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 KDELR2P33947 212 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 APLNRP35414 380 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 RAD52P43351 418 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 ARFIP2P53365 341 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 SELENOVP59797 346 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 LMO4P61968 165 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 CCL8P80075 99 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 GLO1Q04760 184 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 TOP3AQ13472 1001 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 PCGF3Q3KNV8 242 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 ALG10Q5BKT4 473 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 TMEM255AQ5JRV8 349 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 LIPNQ5VXI9 398 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 TMEM154Q6P9G4 183 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 ZNF101Q8IZC7 436 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 ICA1LQ8NDH6 482 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 OR2T12Q8NG77 320 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 C11orf40Q8WZ69 217 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 TMEM186Q96B77 213 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 LRMDAQ9H2I8 198 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 TXNIPQ9H3M7 391 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 HIF1ANQ9NWT6 349 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 SLCO1C1Q9NYB5 712 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 NKIRAS2Q9NYR9 191 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 GPR160Q9UJ42 338 aa14.84□□□□□ -0.03
CHMP1A-205ENST00000548650 NBEAL1Q6ZS30 2694 aa14.83□□□□□ -0.03
CHMP1A-205ENST00000548650 NR2C1P13056 603 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 ITGA2P17301 1181 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 WNT5AP41221 380 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 CD47Q08722 323 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 SF3A3Q12874 501 aaKnown RBP eCLIP14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 LAPTM4AQ15012 233 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 SLC25A47Q6Q0C1 308 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 MICU2Q8IYU8 434 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 CLDN22Q8N7P3 220 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 OR1J1Q8NGS3 322 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 NSMAFQ92636 917 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 TPD52L3Q96J77 140 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 POM121L2Q96KW2 1035 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 ALG12Q9BV10 488 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 CCNB1IP1Q9NPC3 277 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 MAN2C1Q9NTJ4 1040 aa14.83□□□□□ -0.04
CHMP1A-205ENST00000548650 LOC100509620A0A075B734 347 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 LOC100653049A0A140TA62 436 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 GMNCA6NCL1 334 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 CDC14BO60729 498 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 KRT34O76011 436 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 IGHV3-13P01766 116 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 IFI30P13284 250 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 STOMP27105 288 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 ST3GAL3Q11203 375 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 FHL1Q13642 323 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 TAF11Q15544 211 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 AVPI1Q5T686 147 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 FOXL2NBQ6ZUU3 175 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 RFPL4BQ6ZWI9 263 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 IGFN1Q86VF2 1251 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 OFCC1Q8IZS5 231 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 LRRC75AQ8NAA5 344 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 PCYOX1LQ8NBM8 494 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 OR51F2Q8NH61 342 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 AKR7LQ8NHP1 331 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 IPCEF1Q8WWN9 437 aaPredicted RBP14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 BPIFA2Q96DR5 249 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 GID8Q9NWU2 228 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 GMPR2Q9P2T1 348 aaKnown RBP14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 CAPN7Q9Y6W3 813 aa14.82□□□□□ -0.04
CHMP1A-205ENST00000548650 WNK2Q9Y3S1 2297 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 IGHV1-69-2A0A0G2JMI3 117 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 ELOVL7A1L3X0 281 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 HTR3EA5X5Y0 456 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 MAKP20794 623 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 CCNOP22674 350 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 MPV17P39210 176 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms